RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 TMEM187Q14656 261 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 OCIAD2Q56VL3 154 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 CENPVQ7Z7K6 275 aaPredicted RBP17.06■□□□□ 0.32
HOXC13-201ENST00000243056 CISD2Q8N5K1 135 aaKnown RBP17.06■□□□□ 0.32
HOXC13-201ENST00000243056 ZNF738Q8NE65 137 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 C11orf1Q9H5F2 150 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 FBLN5Q9UBX5 448 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 PRSS50Q9UI38 385 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 TYMSP04818 313 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 GLI4P10075 376 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 TSPO2Q5TGU0 170 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 GLIPR1L1Q6UWM5 242 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 CMTM2Q8TAZ6 248 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 C1orf147Q96MC9 270 aaPredicted RBP17.06■□□□□ 0.32
HOXC13-201ENST00000243056 HIPK2Q9H2X6 1198 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 PLA2G3Q9NZ20 509 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 NAT8Q9UHE5 227 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 SLC45A2Q9UMX9 530 aa17.06■□□□□ 0.32
HOXC13-201ENST00000243056 IGHV2OR16-5A0A0B4J2B6 119 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 ZNF709Q8N972 641 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 OR2T10Q8NGZ9 312 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 ZNF845Q96IR2 970 aaPredicted RBP17.05■□□□□ 0.32
HOXC13-201ENST00000243056 SHISA8B8ZZ34 492 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 ISG15P05161 165 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 KCTD18Q6PI47 426 aaPredicted RBP17.05■□□□□ 0.32
HOXC13-201ENST00000243056 OR2D3Q8NGH3 330 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 OR5C1Q8NGR4 320 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 CST9LQ9H4G1 147 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 MMP25Q9NPA2 562 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 MANBALQ9NQG1 85 aa17.05■□□□□ 0.32
HOXC13-201ENST00000243056 RBM7Q9Y580 266 aaKnown RBP17.05■□□□□ 0.32
HOXC13-201ENST00000243056 GFRA3O60609 400 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 ASAH2BP0C7U1 165 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 DUSP1P28562 367 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 RPL15P61313 204 aaKnown RBP17.04■□□□□ 0.32
HOXC13-201ENST00000243056 RPL23P62829 140 aaKnown RBP17.04■□□□□ 0.32
HOXC13-201ENST00000243056 BSXQ3C1V8 233 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 LGI3Q8N145 548 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 SMIM7Q9BQ49 75 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 SH3BGRL2Q9UJC5 107 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 ZZEF1O43149 2961 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 APC2O95996 2303 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 TRAV1-1A0A0B4J248 108 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 LRRC3CA6NJW4 275 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 CTRLP40313 264 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 PIGPP57054 158 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 EMC4Q5J8M3 183 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 SAXO1Q8IYX7 474 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 APH1AQ96BI3 265 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 HSPB9Q9BQS6 159 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 HSPB7Q9UBY9 170 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 ST3GAL6Q9Y274 331 aa17.04■□□□□ 0.32
HOXC13-201ENST00000243056 CLEC18AA5D8T8 446 aa17.03■□□□□ 0.32
HOXC13-201ENST00000243056 ALG1L2C9J202 215 aa17.03■□□□□ 0.32
HOXC13-201ENST00000243056 OR6A2O95222 327 aa17.03■□□□□ 0.32
HOXC13-201ENST00000243056 WT1P19544 449 aaPredicted RBP17.03■□□□□ 0.32
HOXC13-201ENST00000243056 LINC00310P59036 64 aa17.03■□□□□ 0.32
HOXC13-201ENST00000243056 CYP2G1PQ6ZSU1 146 aa17.03■□□□□ 0.32
HOXC13-201ENST00000243056 ODF3L1Q8IXM7 274 aa17.03■□□□□ 0.32
HOXC13-201ENST00000243056 CLEC18CQ8NCF0 446 aa17.03■□□□□ 0.32
HOXC13-201ENST00000243056 C18orf12Q96KH6 178 aa17.03■□□□□ 0.32
HOXC13-201ENST00000243056 CDS2O95674 445 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 ZNF93P35789 620 aaPredicted RBP17.02■□□□□ 0.32
HOXC13-201ENST00000243056 OR3A4PP47883 348 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 DYNLT3P51808 116 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 MTCP1P56278 107 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 GNMTQ14749 295 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 RPS19BP1Q86WX3 136 aaKnown RBP17.02■□□□□ 0.32
HOXC13-201ENST00000243056 OR4D5Q8NGN0 318 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 OR52N5Q8NH56 324 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 GNPNAT1Q96EK6 184 aaPredicted RBP17.02■□□□□ 0.32
HOXC13-201ENST00000243056 ZNF701Q9NV72 531 aaPredicted RBP17.02■□□□□ 0.32
HOXC13-201ENST00000243056 KLRF1Q9NZS2 232 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 TP53TG3Q9ULZ0 132 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 VDAC3Q9Y277 283 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 RNF114Q9Y508 228 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 LOC102724200A0A096LPH7 203 aaPredicted RBP17.02■□□□□ 0.32
HOXC13-201ENST00000243056 CEBPZOSA8MTT3 80 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 MMP23AO75900 390 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 MPZL1O95297 269 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 SYNGR4O95473 234 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 MORN2Q502X0 79 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 ZNF787Q6DD87 383 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 OR5T1Q8NG75 326 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 TMEM59Q9BXS4 323 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 OR51I2Q9H344 312 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 LIME1Q9H400 295 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 ZNF703Q9H7S9 590 aaPredicted RBP17.02■□□□□ 0.32
HOXC13-201ENST00000243056 WIPI2Q9Y4P8 454 aa17.02■□□□□ 0.32
HOXC13-201ENST00000243056 TRAV34A0A0B4J273 112 aa17.01■□□□□ 0.31
HOXC13-201ENST00000243056 LIFP15018 202 aa17.01■□□□□ 0.31
HOXC13-201ENST00000243056 HINT1P49773 126 aaPredicted RBP17.01■□□□□ 0.31
HOXC13-201ENST00000243056 CLDN17P56750 224 aa17.01■□□□□ 0.31
HOXC13-201ENST00000243056 EXT1Q16394 746 aa17.01■□□□□ 0.31
HOXC13-201ENST00000243056 RSPO4Q2I0M5 234 aaPredicted RBP17.01■□□□□ 0.31
HOXC13-201ENST00000243056 LCN15Q6UWW0 184 aa17.01■□□□□ 0.31
HOXC13-201ENST00000243056 RPUSD4Q96CM3 377 aaKnown RBP17.01■□□□□ 0.31
HOXC13-201ENST00000243056 NAA60Q9H7X0 242 aa17.01■□□□□ 0.31
HOXC13-201ENST00000243056 CACNA1GO43497 2377 aa17.01■□□□□ 0.31
HOXC13-201ENST00000243056 GRIFINA4D1Z8 144 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms