RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.39
HDHD3-201ENST00000238379 LRBAP50851 2863 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 DOPEY1Q5JWR5 2465 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 HSD17B6O14756 317 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 ADAP1O75689 374 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 RGS11O94810 467 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 SOD3P08294 240 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 CGB3P0DN86 165 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 CGB7P0DN87 165 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 LUMP51884 338 aaPredicted RBP12.64□□□□□ -0.39
HDHD3-201ENST00000238379 HFEQ30201 348 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 RFESDQ8TAC1 157 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 GLYATL2Q8WU03 294 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 C14orf79Q96F83 325 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 SEC22AQ96IW7 307 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 SUCNR1Q9BXA5 334 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 OR6C3Q9NZP0 311 aa12.64□□□□□ -0.39
HDHD3-201ENST00000238379 USP9XQ93008 2570 aaPredicted RBP12.64□□□□□ -0.39
HDHD3-201ENST00000238379 NKX6-3A6NJ46 265 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 SPINT2O43291 252 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 IGLV2-14P01704 120 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 HTD2P86397 168 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 GNMTQ14749 295 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 TBC1D26Q86UD7 250 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 DTX2Q86UW9 622 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 C9orf62Q8N4C0 152 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 BVESQ8NE79 360 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 TP53RKQ96S44 253 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 FBXO9Q9UK97 447 aaPredicted RBP12.63□□□□□ -0.39
HDHD3-201ENST00000238379 MYO18BQ8IUG5 2567 aa12.63□□□□□ -0.39
HDHD3-201ENST00000238379 C3orf85A0A1B0GTC6 90 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 FAM25EA8MYX2 175 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 OR8U9P0C7N5 309 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 COL8A2P25067 703 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 CMTM1Q8IZ96 169 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 FGFRL1Q8N441 504 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 LRTM2Q8N967 370 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 OR8U1Q8NH10 309 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 GRPEL2Q8TAA5 225 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 MSI2Q96DH6 328 aaKnown RBP12.62□□□□□ -0.39
HDHD3-201ENST00000238379 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 PDCD10Q9BUL8 212 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 C13orf42A0A1B0GVH6 325 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 MPTX1A8MV57 137 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 LYNX1G3V0Z9 82 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 PGLYRP1O75594 196 aaPredicted RBP12.62□□□□□ -0.39
HDHD3-201ENST00000238379 FCN3O75636 299 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 RNF224P0DH78 156 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 LYNX1P0DP58 116 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 PPP1CCP36873 323 aaKnown RBP12.62□□□□□ -0.39
HDHD3-201ENST00000238379 LYPD2Q6UXB3 125 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 GSG1LQ6UXU4 331 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 LIAT1Q6ZQX7 453 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 OR2S2Q9NQN1 319 aa12.62□□□□□ -0.39
HDHD3-201ENST00000238379 SPTAN1Q13813 2472 aaKnown RBP12.61□□□□□ -0.39
HDHD3-201ENST00000238379 C5orf51A6NDU8 294 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 F2RL2O00254 374 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 PHF1O43189 567 aaPredicted RBP12.61□□□□□ -0.39
HDHD3-201ENST00000238379 RP2O75695 350 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 HOXB5P09067 269 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 TCF23Q7RTU1 214 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 NINJ1Q92982 152 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 AKR1E2Q96JD6 320 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 TMEM246Q9BRR3 403 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 TMEM222Q9H0R3 208 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 RAB1BQ9H0U4 201 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 METTL8Q9H825 291 aaKnown RBP12.61□□□□□ -0.39
HDHD3-201ENST00000238379 CALYQ9NYX4 217 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 KAAG1Q9UBP8 84 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 SLC25A10Q9UBX3 287 aaPredicted RBP12.61□□□□□ -0.39
HDHD3-201ENST00000238379 DSCAML1Q8TD84 2053 aa12.61□□□□□ -0.39
HDHD3-201ENST00000238379 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 IGHV3-43A0A0B4J1X8 118 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 A6NNC1 897 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 TNFSF12O43508 249 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 FSTL3O95633 263 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 IGHV3-43DP0DP04 118 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 C17orf58Q2M2W7 97 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 MEX3BQ6ZN04 569 aaKnown RBP12.6□□□□□ -0.39
HDHD3-201ENST00000238379 LHFPL5Q8TAF8 219 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 CORO2AQ92828 525 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 C18orf12Q96KH6 178 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 OR10C1Q96KK4 312 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 HSPB11Q9Y547 144 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 RBM7Q9Y580 266 aaKnown RBP12.6□□□□□ -0.39
HDHD3-201ENST00000238379 TRGV10A0A0A0MS01 117 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 KBTBD11-OT1A0A1B0GTJ5 212 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 ADAM20O43506 726 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 NDUFA2O43678 99 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 F2RP25116 425 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 LOXL3P58215 753 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 IFITM2Q01629 132 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 LGALSLQ3ZCW2 172 aaPredicted RBP12.6□□□□□ -0.39
HDHD3-201ENST00000238379 LGI3Q8N145 548 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 PPP1R1CQ8WVI7 109 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 NMES1Q9C002 83 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 LINC00574Q9H8X3 128 aa12.6□□□□□ -0.39
HDHD3-201ENST00000238379 CTSZQ9UBR2 303 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms