RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 VAMP8Q9BV40 100 aa5.42□□□□□ -1.54
SGIP1-201ENST00000237247 VN1R1Q9GZP7 353 aa5.42□□□□□ -1.54
SGIP1-201ENST00000237247 BANF2Q9H503 90 aa5.42□□□□□ -1.54
SGIP1-201ENST00000237247 MED29Q9NX70 200 aa5.42□□□□□ -1.54
SGIP1-201ENST00000237247 ZNF581Q9P0T4 197 aa5.42□□□□□ -1.54
SGIP1-201ENST00000237247 URGCP-MRPS24S4R325 110 aa5.42□□□□□ -1.54
SGIP1-201ENST00000237247 DCHS1Q96JQ0 3298 aa5.42□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A10PA6NDY2 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A18PA6NE21 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A16PA6NEW6 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A20PA6NIJ5 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A8PA6NJQ4 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A7PA6NKC0 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A22PA8MWA6 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A12PA8MX19 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A5PA8MXJ8 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A23PA8MXZ1 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 ST8SIA3O43173 380 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 DKK1O94907 266 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A15PP0C7V4 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A13PP0C7W8 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A14PP0C7W9 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 FAM90A24PP0C7X0 464 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 CCL2P13500 99 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 PTGDSP41222 190 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 P2RY6Q15077 328 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 RNPS1Q15287 305 aaKnown RBP5.41□□□□□ -1.54
SGIP1-201ENST00000237247 EXT1Q16394 746 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 LRRC10Q5BKY1 277 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 RNF144BQ7Z419 303 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 VASH2Q86V25 355 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 OR52L2PQ8NGH6 319 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 OR5B3Q8NH48 314 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 IL22RA2Q969J5 263 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 EAF1Q96JC9 268 aaPredicted RBP5.41□□□□□ -1.54
SGIP1-201ENST00000237247 TMEM38BQ9NVV0 291 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 BET1LQ9NYM9 111 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 VDAC3Q9Y277 283 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 WIPI2Q9Y4P8 454 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 A0A1W2PR77 199 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 A0A1W2PRS3 328 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 HBE1P02100 147 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 ZNF728P0DKX0 622 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 SFTPDP35247 375 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 MPLP40238 635 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 MTCP1P56278 107 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 HLA-DRB3P79483 266 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 SQSTM1Q13501 440 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 TMEM42Q69YG0 159 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 GNPNAT1Q96EK6 184 aaPredicted RBP5.41□□□□□ -1.54
SGIP1-201ENST00000237247 POM121L2Q96KW2 1035 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 SPIN2AQ99865 258 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 SPIN2BQ9BPZ2 258 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 RPP25Q9BUL9 199 aaKnown RBP5.41□□□□□ -1.54
SGIP1-201ENST00000237247 MCTS1Q9ULC4 181 aaKnown RBP5.41□□□□□ -1.54
SGIP1-201ENST00000237247 TRAV26-1A0A087WT03 109 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 RBFOX3A6NFN3 312 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 C17orf51A8MQB3 221 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 TOX4O94842 621 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 PFN1P07737 140 aaKnown RBP5.41□□□□□ -1.54
SGIP1-201ENST00000237247 GFERP55789 205 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 RIPPLY3P57055 190 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 PAFAH1B2P68402 229 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 MYBPHQ13203 477 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 PRAMEF5Q5TYX0 476 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 PRAMEF6Q5VXH4 476 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 SPSB3Q6PJ21 355 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 METTL27Q8N6F8 245 aaPredicted RBP5.41□□□□□ -1.54
SGIP1-201ENST00000237247 GJC3Q8NFK1 279 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 MS4A10Q96PG2 267 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 GPER1Q99527 375 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 ST6GALNAC5Q9BVH7 336 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 TNFRSF18Q9Y5U5 241 aa5.41□□□□□ -1.54
SGIP1-201ENST00000237247 NKX2-6A6NCS4 301 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 TLX3O43711 291 aaPredicted RBP5.4□□□□□ -1.54
SGIP1-201ENST00000237247 PRKNO60260 465 aaPredicted RBP5.4□□□□□ -1.54
SGIP1-201ENST00000237247 CA3P07451 260 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 SMIM17P0DL12 118 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 IGLC2P0DOY2 106 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 IGLC3P0DOY3 106 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 SLC25A6P12236 298 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 TCN2P20062 427 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 FBXW4P57775 412 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 ZNF92Q03936 586 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 APCDD1LQ8NCL9 501 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 OR1L3Q8NH93 324 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 GUCD1Q96NT3 240 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 PRR13Q9NZ81 148 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 LAMA5O15230 3695 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 IGKV1D-8A0A087WSZ0 117 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 A0A1W2PP11 408 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 OR11H12B2RN74 326 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 H0YL77 283 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 EFNA2O43921 213 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 PSG1P11464 419 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 GLB1P16278 677 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 PI3P19957 117 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 CYB561P49447 251 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 PIGPP57054 158 aa5.4□□□□□ -1.54
SGIP1-201ENST00000237247 EWSR1Q01844 656 aaKnown RBP eCLIP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms