RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 GABRG2P18507 467 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 EMC4Q5J8M3 183 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 PUSL1Q8N0Z8 303 aaKnown RBP9.79□□□□□ -0.84
MSH6-201ENST00000234420 C1orf162Q8NEQ5 155 aaPredicted RBP9.79□□□□□ -0.84
MSH6-201ENST00000234420 OR5A1Q8NGJ0 315 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 PELI1Q96FA3 418 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 OXGR1Q96P68 337 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 A0A1W2PPE3 182 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 TCRBV5S2A0A599 114 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 ERGP11308 486 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 HOXC13P31276 330 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 MRGPRGQ86SM5 289 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 ITLN2Q8WWU7 325 aaPredicted RBP9.79□□□□□ -0.84
MSH6-201ENST00000234420 TNFRSF14Q92956 283 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 FLRT3Q9NZU0 649 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 SHBQ15464 509 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 SLC48A1Q6P1K1 146 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
MSH6-201ENST00000234420 POLEQ07864 2286 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 FGF2P09038 288 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
MSH6-201ENST00000234420 RCC1P18754 421 aaPredicted RBP9.78□□□□□ -0.84
MSH6-201ENST00000234420 MDH2P40926 338 aaKnown RBP9.78□□□□□ -0.84
MSH6-201ENST00000234420 FHITP49789 147 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 XAF1Q6GPH4 301 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 MRPL30Q8TCC3 161 aaKnown RBP9.78□□□□□ -0.84
MSH6-201ENST00000234420 ABHD1Q96SE0 405 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 LINC00587B1AMM8 73 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 PPP1R17O96001 155 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 CCL4P13236 92 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 CDX1P47902 265 aaPredicted RBP9.78□□□□□ -0.84
MSH6-201ENST00000234420 SPANXN1Q5VSR9 72 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 SH2D5Q6ZV89 423 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 OR8I2Q8N0Y5 310 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 FGF11Q92914 225 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 HS3ST2Q9Y278 367 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 PRSS37A4D1T9 235 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 TMEM249Q2WGJ8 235 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 STXBP6Q8NFX7 210 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 SPCS1Q9Y6A9 102 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 KLF4O43474 513 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 SS18L1O75177 396 aaPredicted RBP9.78□□□□□ -0.84
MSH6-201ENST00000234420 FOXF1Q12946 379 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 OR10D3Q8NH80 312 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 ST6GALNAC6Q969X2 333 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 NEU1Q99519 415 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 LINC00470Q9BZP3 86 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
MSH6-201ENST00000234420 HLA-DRB1P01911 266 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
MSH6-201ENST00000234420 EBLN2Q6P2I7 272 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 PRNTQ86SH4 94 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 WNT10AQ9GZT5 417 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 HOXA6P31267 233 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 RIMKLAQ8IXN7 391 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 OR10AG1Q8NH19 301 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 WNT5BQ9H1J7 359 aa9.78□□□□□ -0.84
MSH6-201ENST00000234420 SLIT3O75094 1523 aa9.77□□□□□ -0.84
MSH6-201ENST00000234420 IGHV5-51A0A0C4DH38 117 aa9.77□□□□□ -0.84
MSH6-201ENST00000234420 LDLRAD2Q5SZI1 272 aa9.77□□□□□ -0.84
MSH6-201ENST00000234420 SDF2Q99470 211 aa9.77□□□□□ -0.84
MSH6-201ENST00000234420 PRR32B1ATL7 298 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 CTAG2O75638 210 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 CXCL16Q9H2A7 254 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 SLC25A37Q9NYZ2 338 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 ANXA10Q9UJ72 324 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 ATAD5Q96QE3 1844 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 PSMB11A5LHX3 300 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 PSCAO43653 123 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.77□□□□□ -0.854e-7■■□□□ 11.5
MSH6-201ENST00000234420 GRIFINA4D1Z8 144 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 PTP4A3O75365 173 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 KLK2P20151 261 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 FUT3P21217 361 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 KIAA1644Q3SXP7 199 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 C16orf52Q8NHV5 167 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 RBKSQ9H477 322 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 WBP1LQ9NX94 342 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 P2RY1P47900 373 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 SRSF4Q08170 494 aaKnown RBP9.77□□□□□ -0.85
MSH6-201ENST00000234420 METTL26Q96S19 204 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 JKAMPQ9P055 326 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.77□□□□□ -0.85
MSH6-201ENST00000234420 TRAV38-1A0A0B4J264 116 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 ID1P41134 155 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 B4GALNT1Q00973 533 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 ACER2Q5QJU3 275 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 DDB2Q92466 427 aa9.77□□□□□ -0.85
MSH6-201ENST00000234420 HERPUD1Q15011 391 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 METRNLQ641Q3 311 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 ZNF770Q6IQ21 691 aaPredicted RBP9.76□□□□□ -0.85
MSH6-201ENST00000234420 LINC01560Q8TB33 94 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 WDFY2Q96P53 400 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 NRIP2Q9BQI9 281 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 FNDC4Q9H6D8 234 aaPredicted RBP9.76□□□□□ -0.85
MSH6-201ENST00000234420 ANKRD36A6QL64 1941 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 RICTORQ6R327 1708 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 PLPP1O14494 284 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms