RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PLGLB1Q02325 96 aa13.82□□□□□ -0.2
LTBR-201ENST00000228918 TMEM267Q0VDI3 215 aaPredicted RBP13.82□□□□□ -0.2
LTBR-201ENST00000228918 NCMAPQ5T1S8 102 aa13.82□□□□□ -0.2
LTBR-201ENST00000228918 Q6P435 159 aa13.82□□□□□ -0.2
LTBR-201ENST00000228918 CYB561D1Q8N8Q1 229 aa13.82□□□□□ -0.2
LTBR-201ENST00000228918 J3QT63 122 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 IGKV1-39P01597 117 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 IGLV2-14P01704 120 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 IGKV1D-39P04432 117 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 CA6P23280 308 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 CLN3Q13286 438 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 IZUMO4Q1ZYL8 232 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 DCAF10Q5QP82 559 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 OR2T2Q6IF00 324 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 Q6ZRM9 215 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 LINC00696Q6ZRV3 163 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 MCEMP1Q8IX19 187 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 IL1F10Q8WWZ1 152 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 WSB1Q9Y6I7 421 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 ZDBF2Q9HCK1 2354 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 A0A087WWC5 75 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 LRP5LA4QPB2 252 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.81□□□□□ -0.2
LTBR-201ENST00000228918 CNOT4O95628 575 aaKnown RBP13.81□□□□□ -0.2
LTBR-201ENST00000228918 IL18BPO95998 194 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 HOXA5P20719 270 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 CEBPGP53567 150 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 IGFBP7Q16270 282 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 PYY3Q5JQD4 70 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 THNSL2Q86YJ6 484 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 OR1K1Q8NGR3 316 aa13.81□□□□□ -0.2
LTBR-201ENST00000228918 RNASE11Q8TAA1 199 aaKnown RBP13.81□□□□□ -0.2
LTBR-201ENST00000228918 LSM10Q969L4 123 aaKnown RBP13.81□□□□□ -0.2
LTBR-201ENST00000228918 A0A1W2PNU3 283 aaPredicted RBP13.8□□□□□ -0.2
LTBR-201ENST00000228918 IFNA5P01569 189 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 IFNA17P01571 189 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 MDH2P40926 338 aaKnown RBP13.8□□□□□ -0.2
LTBR-201ENST00000228918 UBE2KP61086 200 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 TESK1Q15569 626 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 MOB1BQ7L9L4 216 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 ZNF429Q86V71 674 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 GPR87Q9BY21 358 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 UFSP2Q9NUQ7 469 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 CACNG5Q9UF02 275 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 MED13Q9UHV7 2174 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 TRAV1-1A0A0B4J248 108 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 IFITM10A6NMD0 228 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 ZNF883P0CG24 379 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 TAGLN2P37802 199 aaKnown RBP13.8□□□□□ -0.2
LTBR-201ENST00000228918 KHDC3LQ587J8 217 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 C12orf49Q9H741 205 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 GP6Q9HCN6 339 aa13.8□□□□□ -0.2
LTBR-201ENST00000228918 TRAV39A0A0B4J263 110 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 LOC102723971A0A1B0GUV8 181 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 ZNF727A8MUV8 499 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 C21orf140B9A014 251 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 MT-CO3P00414 261 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 MEOX1P50221 254 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 DLK1P80370 383 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 SPATA46Q5T0L3 261 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 SLC25A24Q6NUK1 477 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 MDP1Q86V88 176 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 BCL2L2Q92843 193 aaPredicted RBP13.79□□□□□ -0.2
LTBR-201ENST00000228918 SYNGR2O43760 224 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 IGKV1-5P01602 117 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 CDX1P47902 265 aaPredicted RBP13.79□□□□□ -0.2
LTBR-201ENST00000228918 FIP1L1Q6UN15 594 aaKnown RBP13.79□□□□□ -0.2
LTBR-201ENST00000228918 WDR86Q86TI4 376 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 TVP23CQ96ET8 276 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 NIPSNAP3BQ9BS92 247 aa13.79□□□□□ -0.2
LTBR-201ENST00000228918 A0A1W2PR80 420 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 SIRPB1O00241 398 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 LY86O95711 162 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 ZNF497Q6ZNH5 498 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 P4HA3Q7Z4N8 544 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 OR10G4Q8NGN3 311 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 NANOS1Q8WY41 292 aaKnown RBP13.78□□□□□ -0.2
LTBR-201ENST00000228918 C14orf144Q96I85 54 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 RSG1Q9BU20 258 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 RTL8AQ9BWD3 113 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 MMP24Q9Y5R2 645 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 FAM186AA6NE01 2351 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 YIF1AO95070 293 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 OR2H2O95918 312 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 IAPPP10997 89 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 RPS10P46783 165 aaKnown RBP13.78□□□□□ -0.2
LTBR-201ENST00000228918 ELOBQ15370 118 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 SLC35E3Q7Z769 313 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 ZNF383Q8NA42 475 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 LIN7CQ9NUP9 197 aaKnown RBP13.78□□□□□ -0.2
LTBR-201ENST00000228918 PPP1R3CQ9UQK1 317 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 R4GN57 208 aa13.78□□□□□ -0.2
LTBR-201ENST00000228918 SP1P08047 785 aa13.77□□□□□ -0.21
LTBR-201ENST00000228918 RNF224P0DH78 156 aa13.77□□□□□ -0.21
LTBR-201ENST00000228918 ARL16Q0P5N6 197 aa13.77□□□□□ -0.21
LTBR-201ENST00000228918 ZNF585BQ52M93 769 aa13.77□□□□□ -0.21
LTBR-201ENST00000228918 PRR18Q8N4B5 295 aa13.77□□□□□ -0.21
LTBR-201ENST00000228918 ZNF525Q8N782 197 aa13.77□□□□□ -0.21
LTBR-201ENST00000228918 Q8WTZ3 238 aa13.77□□□□□ -0.21
LTBR-201ENST00000228918 RPRMQ9NS64 109 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms