RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 AMMECR1Q9Y4X0 333 aaPredicted RBP10.19□□□□□ -0.78
LSM5-201ENST00000223084 MMP24Q9Y5R2 645 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 CLPSL1A2RUU4 121 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 AIREO43918 545 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 GNB3P16520 340 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 RAB6AP20340 208 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 REG1BP48304 166 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 ZNF134P52741 427 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 SRSF4Q08170 494 aaKnown RBP10.18□□□□□ -0.78
LSM5-201ENST00000223084 MADCAM1Q13477 382 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 HMGN3Q15651 99 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 CT45A1Q5HYN5 189 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 ZNF880Q6PDB4 577 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 ZNF439Q8NDP4 499 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 OR10R2Q8NGX6 335 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 CT45A3Q8NHU0 189 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 RAB3CQ96E17 227 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 CMSS1Q9BQ75 279 aaKnown RBP10.18□□□□□ -0.78
LSM5-201ENST00000223084 ZNF747Q9BV97 191 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 ATG5Q9H1Y0 275 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 RAB9BQ9NP90 201 aa10.18□□□□□ -0.78
LSM5-201ENST00000223084 A0A075B6Q4 140 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 A0A1W2PPI3 338 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 POM121CA8CG34 1229 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 RAB27BO00194 218 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 TSPAN9O75954 239 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 BRS3P32247 399 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 PPP1CCP36873 323 aaKnown RBP10.17□□□□□ -0.78
LSM5-201ENST00000223084 TIMM50Q3ZCQ8 353 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 MORN2Q502X0 79 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 IDNKQ5T6J7 187 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 LINC00311Q8N616 119 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 DRAM1Q8N682 238 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 OR5H6Q8NGV6 325 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 LGALS14Q8TCE9 139 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 C16orf95Q9H693 158 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 RAB18Q9NP72 206 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 RNF114Q9Y508 228 aa10.17□□□□□ -0.78
LSM5-201ENST00000223084 TRBV6-6A0A0A6YYG2 114 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 A0A1B0GUS0 222 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 OOSP1A8MZH6 123 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 HSD17B6O14756 317 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 TIMM23O14925 209 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 MNDAP41218 407 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 KRTAP10-3P60369 221 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 HABP2Q14520 560 aaPredicted RBP10.16□□□□□ -0.78
LSM5-201ENST00000223084 TMEM30BQ3MIR4 351 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 CCDC144NLQ6NUI1 221 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 LIAT1Q6ZQX7 453 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 SLC25A48Q6ZT89 311 aaKnown RBP10.16□□□□□ -0.78
LSM5-201ENST00000223084 ZNF554Q86TJ5 538 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 OR56B4Q8NH76 319 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 CAPSLQ8WWF8 208 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 IL1F10Q8WWZ1 152 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 PTX4Q96A99 478 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 GALMQ96C23 342 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 RBMXL1Q96E39 390 aaKnown RBP10.16□□□□□ -0.78
LSM5-201ENST00000223084 OCSTAMPQ9BR26 566 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 FUNDC2Q9BWH2 189 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 NPFFR1Q9GZQ6 430 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 RIMS4Q9H426 269 aaPredicted RBP10.16□□□□□ -0.78
LSM5-201ENST00000223084 Q9N2K0 584 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 C12orf4Q9NQ89 552 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 ABRACLQ9P1F3 81 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 PITPNC1Q9UKF7 332 aa10.16□□□□□ -0.78
LSM5-201ENST00000223084 ELF5Q9UKW6 265 aaPredicted RBP10.16□□□□□ -0.78
LSM5-201ENST00000223084 IGHV3-72A0A0B4J1Y9 119 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 METTL21EPA6NDL7 271 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 MFNGO00587 321 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 SNRNP70P08621 437 aaKnown RBP10.15□□□□□ -0.78
LSM5-201ENST00000223084 SCTP09683 121 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 CD3GP09693 182 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 HIST1H1DP16402 221 aaKnown RBP10.15□□□□□ -0.78
LSM5-201ENST00000223084 RPS19P39019 145 aaKnown RBP10.15□□□□□ -0.78
LSM5-201ENST00000223084 ARHGDIBP52566 201 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 PROK1P58294 105 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 BLCAPP62952 87 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 HLA-DRB3P79483 266 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 HTD2P86397 168 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 Q3ZCU0 254 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 Q6ZS46 218 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 MOB1BQ7L9L4 216 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 MOB3BQ86TA1 216 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 C8orf31Q8N9H6 132 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 OR4C13Q8NGP0 309 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 OR13F1Q8NGS4 319 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 WFDC12Q8WWY7 111 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 MAFIPQ8WZ33 124 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 CFHR4Q92496 578 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 ST6GALNAC6Q969X2 333 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 PARP12Q9H0J9 701 aaKnown RBP10.15□□□□□ -0.78
LSM5-201ENST00000223084 ZNF702PQ9H963 129 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 JPT1Q9UK76 154 aa10.15□□□□□ -0.78
LSM5-201ENST00000223084 IGHV1-3A0A0C4DH29 117 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 SH2D7A6NKC9 451 aaPredicted RBP10.14□□□□□ -0.79
LSM5-201ENST00000223084 FAM90A9PA6NNJ1 464 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 YPEL1O60688 119 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 GAPDHP04406 335 aaKnown RBP10.14□□□□□ -0.79
LSM5-201ENST00000223084 KIR2DS4P43632 304 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 RAB7AP51149 207 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms