RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RNF115Q9Y4L5 304 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 TM4SF5O14894 197 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 PGLYRP1O75594 196 aaPredicted RBP18.81■□□□□ 0.6
CCDC9-201ENST00000221922 RHBDL1O75783 438 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 CELA3BP08861 270 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 RAC2P15153 192 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 SELEP16581 610 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 NBL1P41271 181 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 MOB1BQ7L9L4 216 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 C17orf78Q8N4C9 275 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 FAM24BQ8N5W8 94 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 YPEL4Q96NS1 127 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 CABLES2Q9BTV7 478 aa18.81■□□□□ 0.6
CCDC9-201ENST00000221922 hCG_1809904A0A1W2PP81 198 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 A0A1W2PPE3 182 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 A0A1W2PR64 198 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 A0A1W2PRV1 198 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 CHST1O43916 411 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 WISP2O76076 250 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 ARG1P05089 322 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 SMIM6P0DI80 62 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 OR10J5Q8NHC4 309 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 OR2J1Q9GZK6 312 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 UNKLQ9H9P5 680 aaKnown RBP18.8■□□□□ 0.6
CCDC9-201ENST00000221922 TAAR3PQ9P1P4 343 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 ZNF292O60281 2723 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 A0A1W2PPE2 198 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 CST7O76096 145 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 PAX9P55771 341 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 GABRA6Q16445 453 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 Q6P435 159 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 MYPOPQ86VE0 399 aaPredicted RBP18.8■□□□□ 0.6
CCDC9-201ENST00000221922 OR2W1Q9Y3N9 320 aa18.8■□□□□ 0.6
CCDC9-201ENST00000221922 LYZL6O75951 148 aa18.79■□□□□ 0.6
CCDC9-201ENST00000221922 IGHV2-5P01817 119 aa18.79■□□□□ 0.6
CCDC9-201ENST00000221922 EPHA1P21709 976 aa18.79■□□□□ 0.6
CCDC9-201ENST00000221922 F2RP25116 425 aa18.79■□□□□ 0.6
CCDC9-201ENST00000221922 OR8G1Q15617 311 aa18.79■□□□□ 0.6
CCDC9-201ENST00000221922 ZNF324BQ6AW86 544 aaPredicted RBP18.79■□□□□ 0.6
CCDC9-201ENST00000221922 C20orf204Q6ZNR8 217 aa18.79■□□□□ 0.6
CCDC9-201ENST00000221922 SCCPDHQ8NBX0 429 aa18.79■□□□□ 0.6
CCDC9-201ENST00000221922 IQCF6A8MYZ5 107 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 WNT2P09544 360 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 SLC25A6P12236 298 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 H1FOOQ8IZA3 346 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-201ENST00000221922 SEBOXQ9HB31 216 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-201ENST00000221922 PUS1Q9Y606 427 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC9-201ENST00000221922 NPIPB11E5RHQ5 1161 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 SRP19P09132 144 aaKnown RBP18.78■□□□□ 0.6
CCDC9-201ENST00000221922 COX5AP20674 150 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 KIR2DL2P43627 348 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-201ENST00000221922 ERVK11-1P61568 191 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 RPS23P62266 143 aaKnown RBP18.78■□□□□ 0.6
CCDC9-201ENST00000221922 DPPA3Q6W0C5 159 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 C1QL4Q86Z23 238 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 ZADH2Q8N4Q0 377 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 C9orf106Q8NAJ2 232 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 SLC25A40Q8TBP6 338 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 ATP5SQ99766 215 aa18.78■□□□□ 0.6
CCDC9-201ENST00000221922 CNOT1A5YKK6 2376 aaKnown RBP18.78■□□□□ 0.6
CCDC9-201ENST00000221922 A0A1W2PR80 420 aa18.77■□□□□ 0.6
CCDC9-201ENST00000221922 SPINK2P20155 84 aa18.77■□□□□ 0.6
CCDC9-201ENST00000221922 HOXC12P31275 282 aa18.77■□□□□ 0.6
CCDC9-201ENST00000221922 IGFL3Q6UXB1 125 aa18.77■□□□□ 0.6
CCDC9-201ENST00000221922 WDR86Q86TI4 376 aa18.77■□□□□ 0.6
CCDC9-201ENST00000221922 TMEM217Q8N7C4 229 aa18.77■□□□□ 0.6
CCDC9-201ENST00000221922 C1orf162Q8NEQ5 155 aaPredicted RBP18.77■□□□□ 0.6
CCDC9-201ENST00000221922 CELSR3Q9NYQ7 3312 aa18.77■□□□□ 0.6
CCDC9-201ENST00000221922 CACNA1GO43497 2377 aa18.77■□□□□ 0.59
CCDC9-201ENST00000221922 TMEM210A6NLX4 147 aa18.77■□□□□ 0.59
CCDC9-201ENST00000221922 ZNF154Q13106 437 aa18.77■□□□□ 0.59
CCDC9-201ENST00000221922 ACSF3Q4G176 576 aaPredicted RBP18.77■□□□□ 0.59
CCDC9-201ENST00000221922 RBMS3Q6XE24 437 aaKnown RBP18.77■□□□□ 0.59
CCDC9-201ENST00000221922 CNEP1R1Q8N9A8 125 aa18.77■□□□□ 0.59
CCDC9-201ENST00000221922 A0A1B0GU03 582 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 AHRRA9YTQ3 701 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 WRBO00258 174 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 TNFSF12O43508 249 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 OR2C1O95371 312 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 PGA5P0DJD9 388 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 CBR1P16152 277 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 FABP9Q0Z7S8 132 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 ZNF506Q5JVG8 444 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 ADAM5Q6NVV9 412 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 TAAR6Q96RI8 345 aa18.76■□□□□ 0.59
CCDC9-201ENST00000221922 A0A0G2JRQ6 117 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 KIAA1324LA8MWY0 1029 aaPredicted RBP18.75■□□□□ 0.59
CCDC9-201ENST00000221922 H3BQ15 152 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 TAS2R30P59541 319 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 RUNX1Q01196 453 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 ICAM4Q14773 271 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 AKR1C8PQ5T2L2 129 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 GPR146Q96CH1 333 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 URB1O60287 2271 aaKnown RBP18.75■□□□□ 0.59
CCDC9-201ENST00000221922 OR2H2O95918 312 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 HSPB1P04792 205 aaKnown RBP18.75■□□□□ 0.59
CCDC9-201ENST00000221922 ERVS71-1P61550 626 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 TLE4Q04727 773 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 ZNF146Q15072 292 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 FIP1L1Q6UN15 594 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms