RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 RNF122Q9H9V4 155 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 CES1P1Q9UKY3 287 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 CTDSPLO15194 276 aa11.83□□□□□ -0.51
TGFBR3-201ENST00000212355 SYNGR1O43759 233 aa11.83□□□□□ -0.51
TGFBR3-201ENST00000212355 GALP22466 123 aa11.83□□□□□ -0.51
TGFBR3-201ENST00000212355 GCSHP23434 173 aa11.83□□□□□ -0.51
TGFBR3-201ENST00000212355 MAP1LC3CQ9BXW4 147 aa11.83□□□□□ -0.51
TGFBR3-201ENST00000212355 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 FAM74A3Q4VXF1 159 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 SLC35E3Q7Z769 313 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 ATOH7Q8N100 152 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 P2RX4Q99571 388 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 CYB5R3P00387 301 aaPredicted RBP11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 RBPMS2Q6ZRY4 209 aaKnown RBP11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 OR2W1Q9Y3N9 320 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 PSG4Q00888 419 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 FAM162BQ5T6X4 162 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 RAB1BQ9H0U4 201 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 MANBALQ9NQG1 85 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 CIDEAO60543 219 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 CFDP00746 253 aaPredicted RBP11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 SLC25A30Q5SVS4 291 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 DEGS2Q6QHC5 323 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 LSMEM1Q8N8F7 131 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 ZNF519Q8TB69 540 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 BET1LQ9NYM9 111 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 NHSL1Q5SYE7 1610 aa11.83□□□□□ -0.52
TGFBR3-201ENST00000212355 IGHV3-35A0A0C4DH35 117 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 RPL36A-HNRNPH2H7BZ11 118 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 ATXN7O15265 892 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 RNASE1P07998 156 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 FCGR3AP08637 254 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 CXorf66Q5JRM2 361 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 OR5A2Q8NGI9 324 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 OR4C12Q96R67 309 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 RALYQ9UKM9 306 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 ATAD5Q96QE3 1844 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 A0A0J9YW62 118 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 IGHV4-34P06331 123 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 ZFP36L2P47974 494 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 OR8I2Q8N0Y5 310 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 OR5AU1Q8NGC0 362 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 GLRX2Q9NS18 164 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 M0R296 226 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 LDLRAD4O15165 306 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 BTF3P20290 206 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 RPL30P62888 115 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 SEC11CQ9BY50 192 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 IGHV3-23P01764 117 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 TRGC2P03986 189 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 ELOBQ15370 118 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 STARD4Q96DR4 205 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 SLC25A10Q9UBX3 287 aaPredicted RBP11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 S4R3C0 116 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 J3QR89 54 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 SSTR5P35346 364 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 MMP16P51512 607 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 TRA2AQ13595 282 aaKnown RBP eCLIP11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 MMDQ15546 238 aa11.82□□□□□ -0.52
TGFBR3-201ENST00000212355 CXorf65A6NEN9 183 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 NDUFB4O95168 129 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 FHITP49789 147 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 MRPL30Q8TCC3 161 aaKnown RBP11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 RNF7Q9UBF6 113 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 AMMECR1Q9Y4X0 333 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 MPC1Q9Y5U8 109 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 LAMB2P55268 1798 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 J3QR06 171 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 HSD17B13Q7Z5P4 300 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 DNAJC13O75165 2243 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 PLPPR5Q32ZL2 321 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 F5P12259 2224 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 WDR74Q6RFH5 385 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 GUCD1Q96NT3 240 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 WBP1LQ9NX94 342 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 NKX2-8O15522 239 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 CYB5R2Q6BCY4 276 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 DICER1Q9UPY3 1922 aaKnown RBP11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 MYOFQ9NZM1 2061 aa11.81□□□□□ -0.52
TGFBR3-201ENST00000212355 SEMA7AO75326 666 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 PTP4A3O75365 173 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 HINT1P49773 126 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 DGAT2L7PQ6IED9 249 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 SRSF9Q13242 221 aaKnown RBP eCLIP11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 ANKRD55Q3KP44 614 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 RNF133Q8WVZ7 376 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 NEU1Q99519 415 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 ZNF665Q9H7R5 613 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 PARP11Q9NR21 331 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 RBM11P57052 281 aaKnown RBP11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 RAB37Q96AX2 223 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 TMEM74BQ9NUR3 256 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 LINC01387J3KSC0 135 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 TNFSF14O43557 240 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 GCM2O75603 506 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 PGLYRP4Q96LB8 373 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms