RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 UNQ6494/PRO21346Q6UXR6 183 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 RNF138Q8WVD3 245 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 TMED3Q9Y3Q3 217 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 MMP7P09237 267 aaPredicted RBP12.85□□□□□ -0.35
EFNB1-201ENST00000204961 ALDH3B1P43353 468 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 CLN3Q13286 438 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 USF2Q15853 346 aaPredicted RBP12.85□□□□□ -0.35
EFNB1-201ENST00000204961 WDR5BQ86VZ2 330 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 TMEM251Q8N6I4 163 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 OR2M7Q8NG81 312 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 SCGB1C1Q8TD33 95 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 SSX3Q99909 188 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 PLEKHF2Q9H8W4 249 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 MSL2Q9HCI7 577 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 RELNP78509 3460 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 MAP1AP78559 2803 aaPredicted RBP12.85□□□□□ -0.35
EFNB1-201ENST00000204961 FAM157AC9JC47 383 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 TRGC2P03986 189 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 SEC11BP0C7V7 166 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 CEACAM6P40199 344 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 HIST1H3AP68431 136 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 HIST2H3PS2Q5TEC6 136 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 SPNS3Q6ZMD2 512 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 SLC25A22Q9H936 323 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 Q9N2K0 584 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 OBP2BQ9NPH6 170 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 BOKQ9UMX3 212 aaPredicted RBP12.85□□□□□ -0.35
EFNB1-201ENST00000204961 IFNA5P01569 189 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 ARL16Q0P5N6 197 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 VHLLQ6RSH7 139 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 GATAD1Q8WUU5 269 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 CLDN23Q96B33 292 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 TTTY12Q9BZ98 90 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 RPRMQ9NS64 109 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 DOK5Q9P104 306 aa12.85□□□□□ -0.35
EFNB1-201ENST00000204961 GALR2O43603 387 aaPredicted RBP12.84□□□□□ -0.35
EFNB1-201ENST00000204961 GAPDHP04406 335 aaKnown RBP12.84□□□□□ -0.35
EFNB1-201ENST00000204961 RAB5CP51148 216 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 TGFBR3Q03167 851 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 MDP1Q86V88 176 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 STX12Q86Y82 276 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 FAM58AQ8N1B3 248 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 CCDC54Q8NEL0 328 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 OR1J1Q8NGS3 322 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 GALNT14Q96FL9 552 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 SMCO3A2RU48 225 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 FOLR2P14207 255 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 FABP4P15090 132 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 G6PCP35575 357 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 AESQ08117 197 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 IL13RA2Q14627 380 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 ADIRFQ15847 76 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 RTL6Q6ICC9 239 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 OR4D5Q8NGN0 318 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 CLN8Q9UBY8 286 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 COL4A2P08572 1712 aa12.84□□□□□ -0.35
EFNB1-201ENST00000204961 RRP8O43159 456 aaKnown RBP12.83□□□□□ -0.35
EFNB1-201ENST00000204961 NEURL1O76050 574 aa12.83□□□□□ -0.35
EFNB1-201ENST00000204961 IGHV2-5P01817 119 aa12.83□□□□□ -0.35
EFNB1-201ENST00000204961 ERVFRD-1P60508 538 aa12.83□□□□□ -0.35
EFNB1-201ENST00000204961 ZNF266Q14584 549 aa12.83□□□□□ -0.35
EFNB1-201ENST00000204961 GAR1Q9NY12 217 aaKnown RBP12.83□□□□□ -0.35
EFNB1-201ENST00000204961 PSENENQ9NZ42 101 aa12.83□□□□□ -0.35
EFNB1-201ENST00000204961 WNK2Q9Y3S1 2297 aa12.83□□□□□ -0.35
EFNB1-201ENST00000204961 ZGRF1Q86YA3 2104 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 TRAV24A0A0B4J272 114 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 WNT5AP41221 380 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 UBE2G2P60604 165 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 FOXO1Q12778 655 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 SSX7Q7RTT5 188 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 PLPPR1Q8TBJ4 325 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 Q8WTZ3 238 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 GINS3Q9BRX5 216 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 SF3B5Q9BWJ5 86 aaKnown RBP12.83□□□□□ -0.36
EFNB1-201ENST00000204961 GABRA2P47869 451 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 GAMTQ14353 236 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 RTP5Q14D33 572 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 ABHD14BQ96IU4 210 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 DLL3Q9NYJ7 618 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 TAAR3PQ9P1P4 343 aa12.83□□□□□ -0.36
EFNB1-201ENST00000204961 K7N7A8 449 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 RAMP3O60896 148 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 OR3A1P47881 315 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 TMEM211Q6ICI0 200 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 OR52L2PQ8NGH6 319 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 MRGPRDQ8TDS7 321 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 KCNE4Q8WWG9 221 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 POM121Q96HA1 1249 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 NIPSNAP3BQ9BS92 247 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 C9orf172C9J069 976 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 SCAF4O95104 1147 aaKnown RBP12.82□□□□□ -0.36
EFNB1-201ENST00000204961 VDAC1P21796 283 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 FKBP2P26885 142 aaKnown RBP12.82□□□□□ -0.36
EFNB1-201ENST00000204961 DUSP3P51452 185 aaPredicted RBP12.82□□□□□ -0.36
EFNB1-201ENST00000204961 ZFP36L1Q07352 338 aaKnown RBP12.82□□□□□ -0.36
EFNB1-201ENST00000204961 OR8B8Q15620 311 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 PRAMEF6Q5VXH4 476 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 DMRTC2Q8IXT2 367 aaPredicted RBP12.82□□□□□ -0.36
EFNB1-201ENST00000204961 OR1L1Q8NH94 360 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms