RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CYB561P49447 251 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 TRA2AQ13595 282 aaKnown RBP eCLIP11.79□□□□□ -0.52
PHGDH-233ENST00000642021 CMTM1Q8IZ96 169 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 OR8G5Q8NG78 346 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 OR5D13Q8NGL4 314 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 TMEM45BQ96B21 275 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 GNPNAT1Q96EK6 184 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-233ENST00000642021 ABHD14BQ96IU4 210 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 AHCTF1Q8WYP5 2266 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 TRAV39A0A0B4J263 110 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 KIR2DS1A0A191URI9 304 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 PSG2P11465 335 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 KIR2DS4P43632 304 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 BAXQ07812 192 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 KIAA0141Q14154 515 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-233ENST00000642021 KIR2DS1Q14954 304 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 ZNF506Q5JVG8 444 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 AKR1C8PQ5T2L2 129 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 THNSL2Q86YJ6 484 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 HES7Q9BYE0 225 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 ERRFI1Q9UJM3 462 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-233ENST00000642021 TRAV24A0A0B4J272 114 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 BTBD17A6NE02 478 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 H0Y980 276 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 LY86O95711 162 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 RD3LP0DJH9 198 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 CEACAM1P13688 526 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 NDUFB7P17568 137 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 TAS2R30P59541 319 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 TMEM267Q0VDI3 215 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-233ENST00000642021 MPV17LQ2QL34 196 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 ZNF324BQ6AW86 544 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-233ENST00000642021 MKXQ8IYA7 352 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 SAXO1Q8IYX7 474 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 HLA-CQ95604 372 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 ATP5SQ99766 215 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 VSIRQ9H7M9 311 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 R4GN57 208 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 TGIF2-C20orf24A0A0A6YYL0 155 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 DUXBA0A1W2PPF3 345 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 HSPB1P04792 205 aaKnown RBP11.78□□□□□ -0.52
PHGDH-233ENST00000642021 NRN1LQ496H8 165 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 C9orf152Q5JTZ5 239 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 TCEAL7Q9BRU2 100 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 RSG1Q9BU20 258 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 OR51B6Q9H340 312 aa11.78□□□□□ -0.52
PHGDH-233ENST00000642021 DOCK10Q96BY6 2186 aa11.77□□□□□ -0.52
PHGDH-233ENST00000642021 IGKV3D-15A0A087WSY6 115 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 ZNF729A6NN14 1252 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-233ENST00000642021 IGKV1-39P01597 117 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 IGKV1D-39P04432 117 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 JMJD7P0C870 316 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 MMP9P14780 707 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 HOXA5P20719 270 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 PLA2G5P39877 138 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 LHX2P50458 406 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 RPL23AP62750 156 aaKnown RBP11.77□□□□□ -0.53
PHGDH-233ENST00000642021 DEFA6Q01524 100 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 IL24Q13007 206 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 SNIP1Q8TAD8 396 aaKnown RBP11.77□□□□□ -0.53
PHGDH-233ENST00000642021 PFDN5Q99471 154 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 OR1A1Q9P1Q5 309 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 LRFN1Q9P244 771 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 MRPS18CQ9Y3D5 142 aaKnown RBP11.77□□□□□ -0.53
PHGDH-233ENST00000642021 TNRC18O15417 2968 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-233ENST00000642021 CD300LBA8K4G0 201 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 SS18L1O75177 396 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-233ENST00000642021 RHBDL1O75783 438 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 PDGFBP01127 241 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-233ENST00000642021 ZXDAP98168 799 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 ARL16Q0P5N6 197 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 CT55Q8WUE5 264 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 IL1F10Q8WWZ1 152 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 APOBEC3DQ96AK3 386 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-233ENST00000642021 GGACTQ9BVM4 153 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 TMPRSS5Q9H3S3 457 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 UNKLQ9H9P5 680 aaKnown RBP11.77□□□□□ -0.53
PHGDH-233ENST00000642021 DOK5Q9P104 306 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 OR2W1Q9Y3N9 320 aa11.77□□□□□ -0.53
PHGDH-233ENST00000642021 IGLV2-14P01704 120 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 CTXN2P0C2S0 81 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 NDUFA6P56556 154 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 RNPS1Q15287 305 aaKnown RBP11.76□□□□□ -0.53
PHGDH-233ENST00000642021 MYPOPQ86VE0 399 aaPredicted RBP11.76□□□□□ -0.53
PHGDH-233ENST00000642021 UBALD1Q8TB05 177 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 POM121L2Q96KW2 1035 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 LURAP1Q96LR2 239 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 RPRMQ9NS64 109 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 CLDN18P56856 261 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 TLE4Q04727 773 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 ZNF674Q2M3X9 581 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 SSX7Q7RTT5 188 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 OR5A2Q8NGI9 324 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 OR5P3Q8WZ94 311 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 IL22RA2Q969J5 263 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 TVP23CQ96ET8 276 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 LINC00470Q9BZP3 86 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 GNG13Q9P2W3 67 aa11.76□□□□□ -0.53
PHGDH-233ENST00000642021 A0A087WWC5 75 aa11.75□□□□□ -0.53
PHGDH-233ENST00000642021 NEURL1O76050 574 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms