RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 EGR1P18146 543 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 PRDX2P32119 198 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 ADORA2A-AS1P86434 159 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 SORDQ00796 357 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 PAX5Q02548 391 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 CA5BP1Q8WTZ4 195 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 SUCNR1Q9BXA5 334 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 METTL8Q9H825 291 aaKnown RBP13.81□□□□□ -0.2
PHGDH-216ENST00000641375 GCM1Q9NP62 436 aa13.81□□□□□ -0.2
PHGDH-216ENST00000641375 C13orf42A0A1B0GVH6 325 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 TNFRSF1AP19438 455 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 HOXA4Q00056 320 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-216ENST00000641375 HMGN3Q15651 99 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 PHLDA2Q53GA4 152 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 SPRNQ5BIV9 151 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 C5orf24Q7Z6I8 188 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 PPP1R35Q8TAP8 253 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 PPP1R1CQ8WVI7 109 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 SECTM1Q8WVN6 248 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 IL1F10Q8WWZ1 152 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 PLPPR2Q96GM1 343 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 RNF7Q9UBF6 113 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 OR2W1Q9Y3N9 320 aa13.8□□□□□ -0.2
PHGDH-216ENST00000641375 FXYD6-FXYD2A0A087WZ82 144 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 GNRHRP30968 328 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 OR3A1P47881 315 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 ZNF600Q6ZNG1 722 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 H1FOOQ8IZA3 346 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-216ENST00000641375 CD177Q8N6Q3 437 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 Q8TCH9 128 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 TAF9BQ9HBM6 251 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 NBEAQ8NFP9 2946 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 NKX2-6A6NCS4 301 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 OOEPA6NGQ2 149 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 C17orf100A8MU93 164 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 SHISA9B4DS77 424 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 L7N2F9 121 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 GPR31O00270 319 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 CFDP00746 253 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-216ENST00000641375 CD3EP07766 207 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 CD55P08174 381 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 GABRA2P47869 451 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 RND3P61587 244 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 AESQ08117 197 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 CMTM1Q8IZ96 169 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 BOLLQ8N9W6 283 aaKnown RBP13.79□□□□□ -0.2
PHGDH-216ENST00000641375 OR11L1Q8NGX0 322 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 ST8SIA2Q92186 375 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 C12orf57Q99622 126 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 SLC5A7Q9GZV3 580 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 KCNJ16Q9NPI9 418 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 PRR13Q9NZ81 148 aa13.79□□□□□ -0.2
PHGDH-216ENST00000641375 ERRFI1Q9UJM3 462 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-216ENST00000641375 IGKV1D-17A0A075B6S4 117 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 F8W036 122 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 M0R233 179 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 ARPC5O15511 151 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 HSPA12AO43301 675 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 ADAP1O75689 374 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 OR5AC1P0C628 307 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 PLA2G5P39877 138 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 KRBOX4Q5JUW0 171 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 C11orf87Q6NUJ2 197 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 PRR18Q8N4B5 295 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 PCNPQ8WW12 178 aaKnown RBP13.78□□□□□ -0.2
PHGDH-216ENST00000641375 SAV1Q9H4B6 383 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-216ENST00000641375 TRAV14DV4A0A0A6YYC5 116 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 TRAV39A0A0B4J263 110 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 MPPED1O15442 326 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 IFNA21P01568 189 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 SLC25A4P12235 298 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 IRF2P14316 349 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 S100GP29377 79 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 SSTR2P30874 369 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 TMEM187Q14656 261 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 TESK1Q15569 626 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 LRTM2Q8N967 370 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 GALMQ96C23 342 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 COQ2Q96H96 371 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 SNX22Q96L94 193 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 METRNQ9UJH8 293 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 PPP1R3CQ9UQK1 317 aa13.78□□□□□ -0.2
PHGDH-216ENST00000641375 IGKV1D-13A0A0B4J2D9 117 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-216ENST00000641375 ZNF737O75373 536 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 HOXB5P09067 269 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 IGKV1-13P0DP09 117 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 RPA2P15927 270 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 CXCL2P19875 107 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 TLE1Q04724 770 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 LRRC37A5PQ49AS3 106 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 TRAT1Q6PIZ9 186 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 ZNF818PQ6ZRF7 136 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 ZNF546Q86UE3 836 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 LDLRAD3Q86YD5 345 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 DMRTC2Q8IXT2 367 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-216ENST00000641375 LINC01560Q8TB33 94 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 THAP6Q8TBB0 222 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 FAM222BQ8WU58 562 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 KIAA2026Q5HYC2 2103 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms