RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 C12orf77C9JDV5 145 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 MCRIP1C9JLW8 97 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 IGHG2P01859 326 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 VHLP40337 213 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 RPL23AP62750 156 aaKnown RBP10.99□□□□□ -0.65
LINC00339-211ENST00000641009 EBI3Q14213 229 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 RCN1Q15293 331 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 RAB12Q6IQ22 244 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 SLC35E3Q7Z769 313 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 IZUMO1Q8IYV9 350 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 PRR18Q8N4B5 295 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 TMEM104Q8NE00 496 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 RTN4IP1Q8WWV3 396 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-211ENST00000641009 ST6GALNAC6Q969X2 333 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 DERL3Q96Q80 235 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 SPACA1Q9HBV2 294 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 C8orf4Q9NR00 106 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 ETAA1Q9NY74 926 aa10.99□□□□□ -0.65
LINC00339-211ENST00000641009 EFCAB10A6NFE3 127 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 ZNF736B4DX44 427 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-211ENST00000641009 K7EIL1 84 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 CELP19835 753 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 HOXD3P31249 432 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-211ENST00000641009 CAPGP40121 348 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 TAS2R43P59537 309 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 KRTAP10-11P60412 298 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 C8orf86Q6ZUL3 223 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 AHSA2Q719I0 299 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 OR2W3Q7Z3T1 314 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 MRPL41Q8IXM3 137 aaKnown RBP10.98□□□□□ -0.65
LINC00339-211ENST00000641009 C8orf59Q8N0T1 100 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-211ENST00000641009 STPG2Q8N412 459 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 Q8N6K4 173 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 C8orf31Q8N9H6 132 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 OR51D1Q8NGF3 324 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 OR10V1Q8NGI7 309 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 OR1L1Q8NH94 360 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 MRPS24Q96EL2 167 aaKnown RBP10.98□□□□□ -0.65
LINC00339-211ENST00000641009 SELENOIQ9C0D9 397 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 CNOT2Q9NZN8 540 aaKnown RBP10.98□□□□□ -0.65
LINC00339-211ENST00000641009 PSORS1C1Q9UIG5 152 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 PEX16Q9Y5Y5 336 aa10.98□□□□□ -0.65
LINC00339-211ENST00000641009 MYL12BO14950 172 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 CRTAPO75718 401 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-211ENST00000641009 DUS4LO95620 317 aaKnown RBP10.97□□□□□ -0.65
LINC00339-211ENST00000641009 MGMTP16455 207 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 RCC1P18754 421 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-211ENST00000641009 IL3RAP26951 378 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 THBS3P49746 956 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 ZNF134P52741 427 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 WNT4P56705 351 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 LYPD6Q86Y78 171 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 TGIF2LXQ8IUE1 241 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 FOXRED2Q8IWF2 684 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 Q8N9W7 124 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 ZNF439Q8NDP4 499 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 KLHL30-AS1Q8NEE0 82 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 OR2T10Q8NGZ9 312 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 GNG12Q9UBI6 72 aa10.97□□□□□ -0.65
LINC00339-211ENST00000641009 WI2-2373I1.2A0A1W2PRP0 233 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 UBE2QL1A1L167 161 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 NUDT19A8MXV4 375 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 SPINT2O43291 252 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 HBZP02008 142 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 GPR12P47775 334 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 SLC35B1P78383 322 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 INSL4Q14641 139 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 CT45A1Q5HYN5 189 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 C6orf183Q5T699 404 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 SIGIRRQ6IA17 410 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 SLC25A48Q6ZT89 311 aaKnown RBP10.96□□□□□ -0.65
LINC00339-211ENST00000641009 C5orf24Q7Z6I8 188 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 CDH26Q8IXH8 852 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 GAPTQ8N292 157 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 BPIFB6Q8NFQ5 453 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 CT45A3Q8NHU0 189 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 FAM46BQ96A09 425 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 Q96M66 194 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 ABCG5Q9H222 651 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 PLSCR3Q9NRY6 295 aa10.96□□□□□ -0.65
LINC00339-211ENST00000641009 LIN7CQ9NUP9 197 aaKnown RBP10.96□□□□□ -0.65
LINC00339-211ENST00000641009 SC5DO75845 299 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 MOSP00540 346 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 CD1BP29016 333 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 ZNF137PP52743 207 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 Q3ZCU0 254 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 OGFRL1Q5TC84 451 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-211ENST00000641009 NANOGP1Q8N7R0 232 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 FBLIM1Q8WUP2 373 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 TFAP2CQ92754 450 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 ZFP57Q9NU63 452 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 PLCXD1Q9NUJ7 323 aa10.95□□□□□ -0.66
LINC00339-211ENST00000641009 FAM90A10PA6NDY2 464 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 FAM90A7PA6NKC0 464 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 FAM90A23PA8MXZ1 464 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 AP4M1O00189 453 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 CD1AP06126 327 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 FUT3P21217 361 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 F2RL1P55085 397 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms