RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 SRSF6Q13247 344 aaKnown RBP12.9□□□□□ -0.34
PAX6-277ENST00000640735 KIR2DS1Q14954 304 aa12.9□□□□□ -0.34
PAX6-277ENST00000640735 RNPS1Q15287 305 aaKnown RBP12.9□□□□□ -0.34
PAX6-277ENST00000640735 DCAF10Q5QP82 559 aa12.9□□□□□ -0.34
PAX6-277ENST00000640735 BOD1Q96IK1 185 aa12.9□□□□□ -0.34
PAX6-277ENST00000640735 SPIN2AQ99865 258 aa12.9□□□□□ -0.34
PAX6-277ENST00000640735 SPIN2BQ9BPZ2 258 aa12.9□□□□□ -0.34
PAX6-277ENST00000640735 KPTNQ9Y664 436 aa12.9□□□□□ -0.34
PAX6-277ENST00000640735 SELLP14151 372 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 MMP9P14780 707 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 UCP1P25874 307 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 MAGEA5P43359 124 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 LGALS4P56470 323 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 GNMTQ14749 295 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 HERPUD1Q15011 391 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 ZNF880Q6PDB4 577 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 CLEC9AQ6UXN8 241 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 TBC1D26Q86UD7 250 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 OR5P3Q8WZ94 311 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 IL22RA2Q969J5 263 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 RAB24Q969Q5 203 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 SPACA1Q9HBV2 294 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 FREM2Q5SZK8 3169 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 CEP295Q9C0D2 2601 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 ARID1AO14497 2285 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 A0A1B0GW64 132 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 SLC22A20A6NK97 555 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 CD300LBA8K4G0 201 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 TRAPPC2LH3BP13 241 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 TSPAN15O95858 294 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 WNT2P09544 360 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 SCTP09683 121 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 GLI4P10075 376 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 EWSR1Q01844 656 aaKnown RBP eCLIP12.89□□□□□ -0.35
PAX6-277ENST00000640735 NHLH2Q02577 135 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 CORO2AQ92828 525 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 MPC1Q9Y5U8 109 aa12.89□□□□□ -0.35
PAX6-277ENST00000640735 NCOR2Q9Y618 2525 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 IGKV1-6A0A0C4DH72 117 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 SERTM2A0A1B0GWG4 89 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 NDUFS8O00217 210 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 NGFP01138 241 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 CCL2P13500 99 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 CCNOP22674 350 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 EIF2S3P41091 472 aaKnown RBP12.88□□□□□ -0.35
PAX6-277ENST00000640735 PEA15Q15121 130 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 MIDNQ504T8 468 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 C9orf135Q5VTT2 229 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 ZNF565Q8N9K5 539 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 PIMREGQ9BSJ6 248 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 C19orf12Q9NSK7 152 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
PAX6-277ENST00000640735 UBE2J1Q9Y385 318 aaPredicted RBP12.88□□□□□ -0.35
PAX6-277ENST00000640735 OR5B21A6NL26 309 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 AGPAT2O15120 278 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 NFYBP25208 207 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 NKX2-1P43699 371 aaPredicted RBP12.87□□□□□ -0.35
PAX6-277ENST00000640735 PLP2Q04941 152 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 NMSQ5H8A3 153 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 ZNF818PQ6ZRF7 136 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 BATF2Q8N1L9 274 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 MRPL30Q8TCC3 161 aaKnown RBP12.87□□□□□ -0.35
PAX6-277ENST00000640735 HIST1H2AAQ96QV6 131 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 PKIBQ9C010 78 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 EGLN1Q9GZT9 426 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 MLXQ9UH92 298 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 FRYQ5TBA9 3013 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 IGKV1D-13A0A0B4J2D9 117 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 MEX3AA1L020 520 aaKnown RBP12.87□□□□□ -0.35
PAX6-277ENST00000640735 COLCA2A8K830 154 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 K7N7A8 449 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 NME2P1O60361 137 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 PITX3O75364 302 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 IGKV1-13P0DP09 117 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 ID3Q02535 119 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 GUK1Q16774 197 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 KHDC1LQ5JSQ8 128 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 PCSK4Q6UW60 755 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 NUFIP2Q7Z417 695 aaKnown RBP12.87□□□□□ -0.35
PAX6-277ENST00000640735 ZNF695Q8IW36 515 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 GAPTQ8N292 157 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 MDS2Q8NDY4 140 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 ZCCHC14Q8WYQ9 949 aaKnown RBP12.87□□□□□ -0.35
PAX6-277ENST00000640735 IP6K3Q96PC2 410 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 ZNF552Q9H707 407 aaPredicted RBP12.87□□□□□ -0.35
PAX6-277ENST00000640735 PLEKHF2Q9H8W4 249 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 SMCO4Q9NRQ5 59 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 IL36RNQ9UBH0 155 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 RAXQ9Y2V3 346 aa12.87□□□□□ -0.35
PAX6-277ENST00000640735 SYNGR1O43759 233 aa12.86□□□□□ -0.35
PAX6-277ENST00000640735 SP1P08047 785 aa12.86□□□□□ -0.35
PAX6-277ENST00000640735 FOLR2P14207 255 aa12.86□□□□□ -0.35
PAX6-277ENST00000640735 WT1P19544 449 aaPredicted RBP12.86□□□□□ -0.35
PAX6-277ENST00000640735 ITGA3P26006 1051 aa12.86□□□□□ -0.35
PAX6-277ENST00000640735 COTL1Q14019 142 aa12.86□□□□□ -0.35
PAX6-277ENST00000640735 ZNF573Q86YE8 665 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms