RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 Q3ZCU0 254 aa20.07■□□□□ 0.8
VEGFA-232ENST00000640653 TRAT1Q6PIZ9 186 aa20.07■□□□□ 0.8
VEGFA-232ENST00000640653 TMEM104Q8NE00 496 aa20.07■□□□□ 0.8
VEGFA-232ENST00000640653 UBALD1Q8TB05 177 aa20.07■□□□□ 0.8
VEGFA-232ENST00000640653 CST11Q9H112 138 aa20.07■□□□□ 0.8
VEGFA-232ENST00000640653 G3V4G9 280 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 H0YHG0 523 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 UBBP0CG47 229 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 FUT3P21217 361 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 LOXL3P58215 753 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 GLT8D1Q68CQ7 371 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 GAPTQ8N292 157 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 OR4X2Q8NGF9 303 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 OR4K15Q8NH41 348 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 NRG4Q8WWG1 115 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 PHYHIPQ92561 330 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 LSM2Q9Y333 95 aaKnown RBP20.06■□□□□ 0.8
VEGFA-232ENST00000640653 TPRKBQ9Y3C4 175 aa20.06■□□□□ 0.8
VEGFA-232ENST00000640653 IGHV3-43A0A0B4J1X8 118 aa20.05■□□□□ 0.8
VEGFA-232ENST00000640653 C12orf77C9JDV5 145 aa20.05■□□□□ 0.8
VEGFA-232ENST00000640653 SC5DO75845 299 aa20.05■□□□□ 0.8
VEGFA-232ENST00000640653 IGHV3-43DP0DP04 118 aa20.05■□□□□ 0.8
VEGFA-232ENST00000640653 INSL4Q14641 139 aa20.05■□□□□ 0.8
VEGFA-232ENST00000640653 RBM48Q5RL73 367 aaKnown RBP20.05■□□□□ 0.8
VEGFA-232ENST00000640653 MOB3BQ86TA1 216 aa20.05■□□□□ 0.8
VEGFA-232ENST00000640653 FAM46BQ96A09 425 aa20.05■□□□□ 0.8
VEGFA-232ENST00000640653 IGHV1-3A0A0C4DH29 117 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 TCRBV4S1A1TA0A5B7 111 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 FGF16O43320 207 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 PDCD6O75340 191 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 IGKV1D-33P01593 117 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 IGKV1-33P01594 117 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 SLC35A2P78381 396 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 HNF4GQ14541 408 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 FAM27D1Q5T7N8 215 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 SAMD5Q5TGI4 173 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 UFD1Q92890 307 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 GNG12Q9UBI6 72 aa20.04■□□□□ 0.8
VEGFA-232ENST00000640653 TSSC4Q9Y5U2 329 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-232ENST00000640653 A0A1W2PRX2 142 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 UBE2QL1A1L167 161 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 MPIG6BO95866 241 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 HBZP02008 142 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 MYF6P23409 242 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 VHLP40337 213 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 REG1BP48304 166 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 GP2P55259 537 aaKnown RBP20.03■□□□□ 0.8
VEGFA-232ENST00000640653 IRF3Q14653 427 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 BEAN1Q3B7T3 259 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 HSD17B12Q53GQ0 312 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 CEACAM19Q7Z692 300 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 LRRTM1Q86UE6 522 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 PRR18Q8N4B5 295 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 C5orf56Q8N8D9 126 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 SGCDQ92629 289 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 VCX3BQ9H321 246 aa20.03■□□□□ 0.8
VEGFA-232ENST00000640653 SIGIRRQ6IA17 410 aa20.02■□□□□ 0.8
VEGFA-232ENST00000640653 KCNIP1Q9NZI2 227 aa20.02■□□□□ 0.8
VEGFA-232ENST00000640653 PF4V1P10720 104 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 RCC1P18754 421 aaPredicted RBP20.01■□□□□ 0.79
VEGFA-232ENST00000640653 SRMP19623 302 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 EBI3Q14213 229 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 TCTEX1D4Q5JR98 221 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 C1orf100Q5SVJ3 147 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 LIPKQ5VXJ0 399 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 FAM53AQ6NSI3 398 aaPredicted RBP20.01■□□□□ 0.79
VEGFA-232ENST00000640653 SLC25A48Q6ZT89 311 aaKnown RBP20.01■□□□□ 0.79
VEGFA-232ENST00000640653 ZNF554Q86TJ5 538 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 IZUMO1Q8IYV9 350 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 OR1L1Q8NH94 360 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 RTN4IP1Q8WWV3 396 aaPredicted RBP20.01■□□□□ 0.79
VEGFA-232ENST00000640653 NEDD4LQ96PU5 975 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 ANKRD60Q9BZ19 345 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 DUSP21Q9H596 190 aa20.01■□□□□ 0.79
VEGFA-232ENST00000640653 MBNL3Q9NUK0 354 aaKnown RBP20.01■□□□□ 0.79
VEGFA-232ENST00000640653 TXNL1O43396 289 aa20■□□□□ 0.79
VEGFA-232ENST00000640653 RGS10O43665 173 aa20■□□□□ 0.79
VEGFA-232ENST00000640653 UCHL1P09936 223 aa20■□□□□ 0.79
VEGFA-232ENST00000640653 NKAPLQ5M9Q1 402 aa20■□□□□ 0.79
VEGFA-232ENST00000640653 KPRPQ5T749 579 aaPredicted RBP20■□□□□ 0.79
VEGFA-232ENST00000640653 OR10V1Q8NGI7 309 aa20■□□□□ 0.79
VEGFA-232ENST00000640653 ST6GALNAC6Q969X2 333 aa20■□□□□ 0.79
VEGFA-232ENST00000640653 TMEM59Q9BXS4 323 aa20■□□□□ 0.79
VEGFA-232ENST00000640653 TAF9BQ9HBM6 251 aa20■□□□□ 0.79
VEGFA-232ENST00000640653 IGHV3-72A0A0B4J1Y9 119 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 PSMB11A5LHX3 300 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 SLC31A2O15432 143 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 HSMCR30P0CW71 290 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 VSIG8P0DPA2 414 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 HTR2CP28335 458 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 TRAM1Q15629 374 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 KHDC1LQ5JSQ8 128 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 ZNF439Q8NDP4 499 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 OR2T10Q8NGZ9 312 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 KCNG3Q8TAE7 436 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 EAF1Q96JC9 268 aaPredicted RBP19.99■□□□□ 0.79
VEGFA-232ENST00000640653 ISYNA1Q9NPH2 558 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 NOTCH1P46531 2555 aa19.99■□□□□ 0.79
VEGFA-232ENST00000640653 CD1BP29016 333 aa19.98■□□□□ 0.79
VEGFA-232ENST00000640653 ZNF137PP52743 207 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms