RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 BDP1A6H8Y1 2624 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 LAMTOR5O43504 91 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 DNPH1O43598 174 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 F2RP25116 425 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 C6orf15Q6UXA7 325 aaPredicted RBP12.46□□□□□ -0.42
SCARB2-221ENST00000640341 CXorf67Q86X51 503 aaPredicted RBP12.46□□□□□ -0.42
SCARB2-221ENST00000640341 FAM185AQ8N0U4 392 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 Q8WTZ3 238 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 TMEM56Q96MV1 263 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 PRDM14Q9GZV8 571 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 TAAR3PQ9P1P4 343 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 ATP23Q9Y6H3 246 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 TMEM56-RWDD3S4R434 201 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 SCAF4O95104 1147 aaKnown RBP12.45□□□□□ -0.42
SCARB2-221ENST00000640341 SMIM6P0DI80 62 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 NMSQ5H8A3 153 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 ALKBH2Q6NS38 261 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 ODF3L1Q8IXM7 274 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 APOBEC3DQ96AK3 386 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-221ENST00000640341 ZNF251Q9BRH9 671 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 NTN3O00634 580 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-221ENST00000640341 NAPSAO96009 420 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 SRP19P09132 144 aaKnown RBP12.45□□□□□ -0.42
SCARB2-221ENST00000640341 GFRA1P56159 465 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 ERVFRD-1P60508 538 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 RAB2AP61019 212 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 TLE4Q04727 773 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 PRSS50Q9UI38 385 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 MED12LQ86YW9 2145 aa12.45□□□□□ -0.42
SCARB2-221ENST00000640341 DEGS1O15121 323 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 RBMXL2O75526 392 aaKnown RBP12.44□□□□□ -0.42
SCARB2-221ENST00000640341 EIF2S3P41091 472 aaKnown RBP12.44□□□□□ -0.42
SCARB2-221ENST00000640341 ICAM4Q14773 271 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 NUFIP2Q7Z417 695 aaKnown RBP12.44□□□□□ -0.42
SCARB2-221ENST00000640341 GNPNAT1Q96EK6 184 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-221ENST00000640341 UCP1P25874 307 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 CEBPDP49716 269 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-221ENST00000640341 FOXO1Q12778 655 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 FAM209BQ5JX69 171 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 FAM53AQ6NSI3 398 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-221ENST00000640341 FAM58AQ8N1B3 248 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 OR2M7Q8NG81 312 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 TAAR9Q96RI9 348 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 ATP5SQ99766 215 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 DEFB127Q9H1M4 99 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 KIAA1456Q9P272 454 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 TRGC2P03986 189 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 GRPP07492 148 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 TUBG1P23258 451 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 APLNRP35414 380 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 ID3Q02535 119 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 C9orf152Q5JTZ5 239 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 MRPL30Q8TCC3 161 aaKnown RBP12.44□□□□□ -0.42
SCARB2-221ENST00000640341 PLSCR2Q9NRY7 297 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 RPRMQ9NS64 109 aa12.44□□□□□ -0.42
SCARB2-221ENST00000640341 METTL1Q9UBP6 276 aaKnown RBP12.44□□□□□ -0.42
SCARB2-221ENST00000640341 USF3Q68DE3 2245 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 TRAV24A0A0B4J272 114 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 SERPINA7P05543 415 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 GFI1BQ5VTD9 330 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 ZNF808Q8N4W9 903 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-221ENST00000640341 NECAP1Q8NC96 275 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 OR5T1Q8NG75 326 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 PLPPR2Q96GM1 343 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 UNKLQ9H9P5 680 aaKnown RBP12.43□□□□□ -0.42
SCARB2-221ENST00000640341 OR2W1Q9Y3N9 320 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 CACNA1GO43497 2377 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 CEBPZOSA8MTT3 80 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 TFF1P04155 84 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 PAX9P55771 341 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 UCP2P55851 309 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 CLN3Q13286 438 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 OR1C1Q15619 314 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 SPINK9Q5DT21 86 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 ZNF787Q6DD87 383 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 CDPF1Q6NVV7 123 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 HEPN1Q6WQI6 88 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 BEND4Q6ZU67 534 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 SPSB4Q96A44 273 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 TMPRSS5Q9H3S3 457 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 PSENENQ9NZ42 101 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 DOK5Q9P104 306 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 B4GALT7Q9UBV7 327 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 CACNA1HO95180 2353 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 CER1O95813 267 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 S100A2P29034 98 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 TESK1Q15569 626 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 PCSK4Q6UW60 755 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 PLPPR1Q8TBJ4 325 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 MUCL1Q96DR8 90 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 TVP23CQ96ET8 276 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 TECTBQ96PL2 329 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 TUBA4BQ9H853 241 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 DLL3Q9NYJ7 618 aa12.43□□□□□ -0.42
SCARB2-221ENST00000640341 MMP9P14780 707 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 ERVS71-1P61550 626 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 ZNF880Q6PDB4 577 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 TOLLIPQ9H0E2 274 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 CDIPTO14735 213 aa12.42□□□□□ -0.42
SCARB2-221ENST00000640341 NEURL1O76050 574 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms