RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 MS4A15Q8N5U1 240 aa12.35□□□□□ -0.43
PTPRVP-204ENST00000639439 C5orf56Q8N8D9 126 aa12.35□□□□□ -0.43
PTPRVP-204ENST00000639439 TFAP2CQ92754 450 aa12.35□□□□□ -0.43
PTPRVP-204ENST00000639439 TRAPPC2LQ9UL33 140 aa12.35□□□□□ -0.43
PTPRVP-204ENST00000639439 PEX16Q9Y5Y5 336 aa12.35□□□□□ -0.43
PTPRVP-204ENST00000639439 IGHV1-3A0A0C4DH29 117 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 PSMB11A5LHX3 300 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 PIN1P1O15428 100 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 RRP9O43818 475 aaKnown RBP12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 CRTAPO75718 401 aaPredicted RBP12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 PF4P02776 101 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 MGMTP16455 207 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 CD33P20138 364 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 FUT3P21217 361 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 LOXL3P58215 753 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 HNF4GQ14541 408 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 SYT6Q5T7P8 510 aaPredicted RBP12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 MOB3BQ86TA1 216 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 IZUMO1Q8IYV9 350 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 CHPT1Q8WUD6 406 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 MND1Q9BWT6 205 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 SELENOIQ9C0D9 397 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 CST11Q9H112 138 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 BANF2Q9H503 90 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 DCLRE1BQ9H816 532 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 NECAP2Q9NVZ3 263 aa12.34□□□□□ -0.43
PTPRVP-204ENST00000639439 C12orf77C9JDV5 145 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 TXNL1O43396 289 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 CDK1P06493 297 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 UBBP0CG47 229 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 KHDC1LQ5JSQ8 128 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 STEAP3Q658P3 488 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 ZNF554Q86TJ5 538 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 TMEM104Q8NE00 496 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 OR2T10Q8NGZ9 312 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 UBALD1Q8TB05 177 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 SGCDQ92629 289 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 Q96M66 194 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 GNG12Q9UBI6 72 aa12.33□□□□□ -0.44
PTPRVP-204ENST00000639439 IGHV3-43A0A0B4J1X8 118 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 SERPINE3A8MV23 424 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 PDCD6O75340 191 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 SC5DO75845 299 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 IGHG2P01859 326 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 IGHV3-43DP0DP04 118 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 CD1BP29016 333 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 REG1BP48304 166 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 SLC35A2P78381 396 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 SLC35B1P78383 322 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 GPR50Q13585 617 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 ACSM3Q53FZ2 586 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 C6orf141Q5SZD1 244 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 GLT8D1Q68CQ7 371 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 UNQ9370/PRO34162Q6UXP9 181 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 SLC25A48Q6ZT89 311 aaKnown RBP12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 SLC35E3Q7Z769 313 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 TGIF2LXQ8IUE1 241 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 FOXRED2Q8IWF2 684 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 COMMD1Q8N668 190 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 OR4K15Q8NH41 348 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 RTN4IP1Q8WWV3 396 aaPredicted RBP12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 PHYHIPQ92561 330 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 ST6GALNAC6Q969X2 333 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 PHF21AQ96BD5 680 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 EAF1Q96JC9 268 aaPredicted RBP12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 SCN3BQ9NY72 215 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 KCNIP1Q9NZI2 227 aa12.32□□□□□ -0.44
PTPRVP-204ENST00000639439 H0YHG0 523 aa12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 DUS4LO95620 317 aaKnown RBP12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 HBZP02008 142 aa12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 SLC6A1P30531 599 aa12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 ZNF137PP52743 207 aa12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 SPHARQ15513 63 aa12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 C10orf99Q6UWK7 81 aa12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 Q8N6K4 173 aa12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 OR8H1Q8NGG4 311 aa12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 RCC1LQ96I51 464 aaKnown RBP12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 MBNL3Q9NUK0 354 aaKnown RBP12.31□□□□□ -0.44
PTPRVP-204ENST00000639439 IGHV3-72A0A0B4J1Y9 119 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 ERICH4A6NGS2 130 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 NCBP2LA6PVI3 153 aaKnown RBP12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 PTGES3LE9PB15 166 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 MOSP00540 346 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 PRB2P02812 416 aaPredicted RBP12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 RCC1P18754 421 aaPredicted RBP12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 SIGIRRQ6IA17 410 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 ZNF329Q86UD4 541 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 PRR18Q8N4B5 295 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 ZNF439Q8NDP4 499 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 OR51D1Q8NGF3 324 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 OR1L1Q8NH94 360 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 NEDD4LQ96PU5 975 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 TAF9BQ9HBM6 251 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 ZFP57Q9NU63 452 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 LIN7CQ9NUP9 197 aaKnown RBP12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 LRRC42Q9Y546 428 aa12.3□□□□□ -0.44
PTPRVP-204ENST00000639439 UBE2QL1A1L167 161 aa12.29□□□□□ -0.44
PTPRVP-204ENST00000639439 AP4M1O00189 453 aa12.29□□□□□ -0.44
PTPRVP-204ENST00000639439 SLC31A2O15432 143 aa12.29□□□□□ -0.44
PTPRVP-204ENST00000639439 MPIG6BO95866 241 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms