RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 A0A0U1RQK1 487 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 ZNF320A2RRD8 509 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 PROB1E7EW31 1015 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 MFNGO00587 321 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 AQP7O14520 342 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 SERPINA5P05154 406 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 CELA3BP08861 270 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 HIST1H1DP16402 221 aaKnown RBP9.87□□□□□ -0.83
CLN6-217ENST00000636964 IGHV1-2P23083 117 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 PSMB6P28072 239 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 ARFRP1Q13795 201 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 PDCD1Q15116 288 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 SPATA46Q5T0L3 261 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 KCTD9Q7L273 389 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 FAM214BQ7L5A3 538 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 MYPOPQ86VE0 399 aaPredicted RBP9.87□□□□□ -0.83
CLN6-217ENST00000636964 OR56B1Q8NGI3 324 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 KIRREL1Q96J84 757 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 RGCCQ9H4X1 137 aa9.87□□□□□ -0.83
CLN6-217ENST00000636964 A0A1W2PPE2 198 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 ATXN7O15265 892 aaPredicted RBP9.86□□□□□ -0.83
CLN6-217ENST00000636964 SS18L1O75177 396 aaPredicted RBP9.86□□□□□ -0.83
CLN6-217ENST00000636964 FBXO24O75426 580 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 HRH1P35367 487 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 TLE4Q04727 773 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 OR8B8Q15620 311 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 LEMD1Q68G75 181 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 BRICD5Q6PL45 260 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 MRPL21Q7Z2W9 205 aaKnown RBP9.86□□□□□ -0.83
CLN6-217ENST00000636964 CASTOR1Q8WTX7 329 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 FAM210BQ96KR6 192 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 SULT4A1Q9BR01 284 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 ZNF816-ZNF321PA0A0X1KG74 233 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 DHRS7CA6NNS2 312 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 CSTBP04080 98 aaKnown RBP9.86□□□□□ -0.83
CLN6-217ENST00000636964 HOXB5P09067 269 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 HOXA5P20719 270 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 MC5RP33032 325 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 APLNRP35414 380 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 IGFBP7Q16270 282 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 TAF9Q16594 264 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 C6orf201Q7Z4U5 140 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 SPSB1Q96BD6 273 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 ST6GALNAC5Q9BVH7 336 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 OR2S2Q9NQN1 319 aa9.86□□□□□ -0.83
CLN6-217ENST00000636964 IGKV1-12A0A0C4DH73 117 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 IGKV1D-12P01611 117 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 KIR2DL2P43627 348 aaPredicted RBP9.85□□□□□ -0.83
CLN6-217ENST00000636964 SSBP1Q04837 148 aaKnown RBP9.85□□□□□ -0.83
CLN6-217ENST00000636964 TMEM42Q69YG0 159 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 CALHM1Q8IU99 346 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 SPSB4Q96A44 273 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 REPIN1Q9BWE0 567 aaKnown RBP9.85□□□□□ -0.83
CLN6-217ENST00000636964 SLC7A11Q9UPY5 501 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 INTS1Q8N201 2190 aaKnown RBP9.85□□□□□ -0.83
CLN6-217ENST00000636964 C13orf42A0A1B0GVH6 325 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 M0R143 59 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 IDH3GP51553 393 aaPredicted RBP9.85□□□□□ -0.83
CLN6-217ENST00000636964 CEBPGP53567 150 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 MALLQ13021 153 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 RBMXL3Q8N7X1 1067 aaKnown RBP9.85□□□□□ -0.83
CLN6-217ENST00000636964 APOBEC3DQ96AK3 386 aaPredicted RBP9.85□□□□□ -0.83
CLN6-217ENST00000636964 MALSU1Q96EH3 234 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 ZNF48Q96MX3 618 aaPredicted RBP9.85□□□□□ -0.83
CLN6-217ENST00000636964 ZNF391Q9UJN7 358 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 COL12A1Q99715 3063 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 LILRA1O75019 489 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 SCGNO76038 276 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 CLEC3BP05452 202 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 ALDH3B1P43353 468 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 FAM89BQ8N5H3 189 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 OR52M1Q8NGK5 317 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 OR51F2Q8NH61 342 aa9.85□□□□□ -0.83
CLN6-217ENST00000636964 AGFG2O95081 481 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 SFTPBP07988 381 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 SNU13P55769 128 aaKnown RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 IL13RA1P78552 427 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 PIGYQ3MUY2 71 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 RPL7L1Q6DKI1 246 aaKnown RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 SSX7Q7RTT5 188 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 HDHD3Q9BSH5 251 aaPredicted RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 SNHG12Q9BXW3 62 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 PECRQ9BY49 303 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 SLC5A7Q9GZV3 580 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 PARP12Q9H0J9 701 aaKnown RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 TUBA4BQ9H853 241 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 GP6Q9HCN6 339 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 GAR1Q9NY12 217 aaKnown RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 CHD8Q9HCK8 2581 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 C3orf80F5H4A9 247 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 RPLP1P05386 114 aaKnown RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 GLP1RP43220 463 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 GPM6AP51674 278 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 FUT6P51993 359 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 UBE2NP61088 152 aaKnown RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 PRDX4Q13162 271 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 ACSF3Q4G176 576 aaPredicted RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 GFI1BQ5VTD9 330 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 IGFL3Q6UXB1 125 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 RPRMLQ8N4K4 120 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms