RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CD40LGP29965 261 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 TNFSF8P32971 234 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 RCVRNP35243 200 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 TAS2R46P59540 309 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 AP3S2P59780 193 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 ERVFRD-1P60508 538 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 HLA-DRB3P79483 266 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 AESQ08117 197 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 ARFRP1Q13795 201 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 HMGN3Q15651 99 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 MOGAT2Q3SYC2 334 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 METTL11BQ5VVY1 283 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 TRAPPC6BQ86SZ2 158 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 RTN4RL2Q86UN3 420 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 BATF2Q8N1L9 274 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 GDPD1Q8N9F7 314 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 OR4M1Q8NGD0 313 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 OR4A4PQ8NGN8 299 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 MRPL30Q8TCC3 161 aaKnown RBP5.53□□□□□ -1.52
UPF3B-205ENST00000636792 GPX8Q8TED1 209 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 H1FXQ92522 213 aaKnown RBP5.53□□□□□ -1.52
UPF3B-205ENST00000636792 CREB3L1Q96BA8 519 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 GALMQ96C23 342 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 SOSTQ9BQB4 213 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 FAAP24Q9BTP7 215 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 TOLLIPQ9H0E2 274 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 NARFLQ9H6Q4 476 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 CHMP1AQ9HD42 196 aaPredicted RBP5.53□□□□□ -1.52
UPF3B-205ENST00000636792 Q9N2K0 584 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 CALYQ9NYX4 217 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 SLC23A1Q9UHI7 598 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 KCNS2Q9ULS6 477 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 KCNK7Q9Y2U2 307 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 KIAA2026Q5HYC2 2103 aa5.53□□□□□ -1.52
UPF3B-205ENST00000636792 A0A1B0GW55 424 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 UBE2QL1A1L167 161 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 TMEM235A6NFC5 223 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 F2RL2O00254 374 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 HSPB6O14558 160 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 PHF1O43189 567 aaPredicted RBP5.52□□□□□ -1.53
UPF3B-205ENST00000636792 FCN3O75636 299 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 HLA-DQB1P01920 261 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 CSF1P09603 554 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 DUX4L2P0CJ85 424 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 DUX4L3P0CJ86 424 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 DUX4L4P0CJ87 422 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 DUX4L5P0CJ88 424 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 DUX4L6P0CJ89 424 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 DUX4L7P0CJ90 424 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 CD99P14209 185 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 MMP9P14780 707 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 GNB3P16520 340 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 PRTN3P24158 256 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 FPR2P25090 351 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 IL2RGP31785 369 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 FAUP35544 74 aaKnown RBP5.52□□□□□ -1.53
UPF3B-205ENST00000636792 GLIPR1P48060 266 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 SEC61A1P61619 476 aaKnown RBP5.52□□□□□ -1.53
UPF3B-205ENST00000636792 LCN2P80188 198 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 HOXA4Q00056 320 aaPredicted RBP5.52□□□□□ -1.53
UPF3B-205ENST00000636792 PAX8Q06710 450 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 PLA2G7Q13093 441 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 IL18Q14116 193 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 EDDM3AQ14507 147 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 TMEM200BQ69YZ2 307 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 DUX4L9Q6RFH8 374 aaPredicted RBP5.52□□□□□ -1.53
UPF3B-205ENST00000636792 FAM131AQ6UXB0 335 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 TCF23Q7RTU1 214 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 HOGA1Q86XE5 327 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 FAM185AQ8N0U4 392 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 BPIFB2Q8N4F0 458 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 FCAMRQ8WWV6 532 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 BORCS5Q969J3 196 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 UPRTQ96BW1 309 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 MSI2Q96DH6 328 aaKnown RBP5.52□□□□□ -1.53
UPF3B-205ENST00000636792 WDR89Q96FK6 387 aaPredicted RBP5.52□□□□□ -1.53
UPF3B-205ENST00000636792 CCDC32Q9BV29 185 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 SIRPDQ9H106 197 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 HEXA-AS1Q9H8Q6 139 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 LPAR2Q9HBW0 351 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 IFT46Q9NQC8 304 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 C19orf12Q9NSK7 152 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 HIF1ANQ9NWT6 349 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 DUX4Q9UBX2 424 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 MTFP1Q9UDX5 166 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 ITGB1BP2Q9UKP3 347 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 RBMX2Q9Y388 322 aaKnown RBP5.52□□□□□ -1.53
UPF3B-205ENST00000636792 V9GYH0 126 aa5.52□□□□□ -1.53
UPF3B-205ENST00000636792 ABCA1O95477 2261 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 WNK2Q9Y3S1 2297 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 NOTCH2Q04721 2471 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 TRDCB7Z8K6 153 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 C15orf65H3BRN8 121 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 FABP7O15540 132 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 YPEL1O60688 119 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 RBBP9O75884 186 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 SLC22A5O76082 557 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 TGFAP01135 160 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 GSTT2BP0CG30 244 aa5.51□□□□□ -1.53
UPF3B-205ENST00000636792 IGHV1-8P0DP01 117 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms