RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TMEM78Q5T7P6 136 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 OR4A5Q8NH83 315 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 ITLN1Q8WWA0 313 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 IGSF23A1L1A6 192 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 HLA-DRB5Q30154 266 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 NPAP1Q9NZP6 1156 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 LINC01387J3KSC0 135 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 NCMAPQ5T1S8 102 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 FAHD1Q6P587 224 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 PHYHIPQ92561 330 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 ISOC2Q96AB3 205 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 IFITM10A6NMD0 228 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 J3QR06 171 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 KCNJ3P48549 501 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 PTOV1Q86YD1 416 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 VKORC1L1Q8N0U8 176 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 AP4M1O00189 453 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 PRR35P0CG20 571 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 CLLU1Q5K131 121 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 MRM1Q6IN84 353 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 ADAD2Q8NCV1 583 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 OR6X1Q8NH79 312 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 PHLDA3Q9Y5J5 127 aa15.6■□□□□ 0.09
CACNA1A-227ENST00000636549 LRRC37A3O60309 1634 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 TMEM189A5PLL7 270 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 ZNF735P0CB33 412 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 ADAT3Q96EY9 351 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 SF3B6Q9Y3B4 125 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 TRIP11Q15643 1979 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 RELBQ01201 579 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 ATP5G2Q06055 141 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 DCAF12L2Q5VW00 463 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 PRSS27Q9BQR3 290 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 FUCA1P04066 466 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 IQCJQ1A5X6 159 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 GLMPQ8WWB7 406 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 OR2H1Q9GZK4 316 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 TMEM229AB2RXF0 380 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 ZNF253O75346 499 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 ERVFRD-1P60508 538 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 MRPL58Q14197 206 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 LY6DQ14210 128 aa15.59■□□□□ 0.09
CACNA1A-227ENST00000636549 PRDX2P32119 198 aa15.58■□□□□ 0.09
CACNA1A-227ENST00000636549 CLDN20P56880 219 aa15.58■□□□□ 0.09
CACNA1A-227ENST00000636549 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 PDCD6O75340 191 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 CD74P04233 296 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 GPX1P07203 203 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 CD226Q15762 336 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 COL5A1-AS1Q5SY13 56 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 CADM3Q8N126 398 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 STARD10Q9Y365 291 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 TSPAN2O60636 221 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 LAMTOR1Q6IAA8 161 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 OR2Y1Q8NGV0 311 aa15.58■□□□□ 0.08
CACNA1A-227ENST00000636549 A0A0B4J2E0 115 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 A0A1B0GX12 115 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 SFT2D2O95562 160 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 CXCL10P02778 98 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 SUMO2P61956 95 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 CORTO00230 105 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 RIPPLY3P57055 190 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 KHDC3LQ587J8 217 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 ASB5Q8WWX0 329 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 TMEM183BQ1AE95 376 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 DPPA3Q6W0C5 159 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 FAM131CQ96AQ9 280 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 TOLLIPQ9H0E2 274 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 ZNF256Q9Y2P7 627 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 B4E171 279 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 TEX30Q5JUR7 227 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 NAT8Q9UHE5 227 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 FUT9Q9Y231 359 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 CX3CL1P78423 397 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 JMJD6Q6NYC1 403 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 WIPI2Q9Y4P8 454 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 SSC5DA1L4H1 1573 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 AANATQ16613 207 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 LRRC75BQ2VPJ9 315 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 TMEM251Q8N6I4 163 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 VN1R17PQ8TDU5 208 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 PAXXQ9BUH6 204 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 SEC11CQ9BY50 192 aa15.57■□□□□ 0.08
CACNA1A-227ENST00000636549 NOVP48745 357 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 ZNF415Q09FC8 603 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 CXorf66Q5JRM2 361 aaPredicted RBP15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 FBXL17Q9UF56 701 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 SYNGR1O43759 233 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 DXOO77932 396 aaKnown RBP15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 SRD5A1P18405 259 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 PAM16Q9Y3D7 125 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 ST3GAL2Q16842 350 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 PRRC2BQ5JSZ5 2229 aaKnown RBP15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 ISL1P61371 349 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 PHYHIPLQ96FC7 376 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 GPR61Q9BZJ8 451 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 IGLV3-27P01718 113 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 SNRPEP62304 92 aaKnown RBP15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 CLEC18BQ6UXF7 455 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 C1orf174Q8IYL3 243 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms