RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 CLN5O75503 358 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 CNOT4O95628 575 aaKnown RBP13.2□□□□□ -0.3
CLN8-209ENST00000635970 SCGB1D2O95969 90 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 SRPXP78539 464 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 ZNF266Q14584 549 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 GNMTQ14749 295 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 UBE2V2Q15819 145 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 SOHLH1Q5JUK2 328 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 RTN4IP1Q8WWV3 396 aaPredicted RBP13.2□□□□□ -0.3
CLN8-209ENST00000635970 ISOC2Q96AB3 205 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 SPSB1Q96BD6 273 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 S100PBPQ96BU1 408 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 YPEL4Q96NS1 127 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 METTL9Q9H1A3 318 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 CXorf65A6NEN9 183 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 COX6B1P14854 86 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 NQO2P16083 231 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 HOXA5P20719 270 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 MSR1P21757 451 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 P2RY6Q15077 328 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 HEPN1Q6WQI6 88 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 C20orf196Q8IYI0 205 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 CCDC71LQ8N9Z2 235 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 SUMF2Q8NBJ7 301 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 CD300LFQ8TDQ1 290 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 MAFIPQ8WZ33 124 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 LYZL4Q96KX0 146 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 WFIKKN1Q96NZ8 548 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 TOLLIPQ9H0E2 274 aa13.2□□□□□ -0.3
CLN8-209ENST00000635970 FBN2P35556 2912 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 ZNF587BE7ETH6 402 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 OR2C1O95371 312 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 OTX1P32242 354 aaPredicted RBP13.19□□□□□ -0.3
CLN8-209ENST00000635970 HTR5AP47898 357 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 C10orf128Q5T292 105 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 FBXW12Q6X9E4 464 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 FOXL2NBQ6ZUU3 175 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 BHLHA15Q7RTS1 189 aaPredicted RBP13.19□□□□□ -0.3
CLN8-209ENST00000635970 C6orf201Q7Z4U5 140 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 GPR137CQ8N3F9 429 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 OR5D18Q8NGL1 313 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 HPSE2Q8WWQ2 592 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 POM121Q96HA1 1249 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 ABHD14BQ96IU4 210 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 SPOCK3Q9BQ16 436 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 LINC00470Q9BZP3 86 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 HIPK2Q9H2X6 1198 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 NELFAQ9H3P2 528 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 OPA3Q9H6K4 179 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 CRLF2Q9HC73 371 aa13.19□□□□□ -0.3
CLN8-209ENST00000635970 IGKV1D-8A0A087WSZ0 117 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 hCG_1809904A0A1W2PP81 198 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 A0A1W2PR64 198 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 A0A1W2PRV1 198 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 ZNF729A6NN14 1252 aaPredicted RBP13.18□□□□□ -0.3
CLN8-209ENST00000635970 ZNF850A8MQ14 1090 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 K7N7A8 449 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 PPIHO43447 177 aaKnown RBP13.18□□□□□ -0.3
CLN8-209ENST00000635970 OR5AC1P0C628 307 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 CDX1P47902 265 aaPredicted RBP13.18□□□□□ -0.3
CLN8-209ENST00000635970 CSNK1A1P48729 337 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 HIST1H3AP68431 136 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 CEACAM16Q2WEN9 425 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 HIKESHIQ53FT3 197 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 IGSF11Q5DX21 431 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 HIST2H3PS2Q5TEC6 136 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 ALKBH2Q6NS38 261 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 ELL3Q9HB65 397 aaPredicted RBP13.18□□□□□ -0.3
CLN8-209ENST00000635970 WFDC1Q9HC57 220 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 GPR35Q9HC97 309 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 CSMD2Q7Z408 3487 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 A0A1W2PR80 420 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 TXNL1O43396 289 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 CDS2O95674 445 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 THBDP07204 575 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 CD81P60033 236 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 DNLZQ5SXM8 178 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 FAM185AQ8N0U4 392 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 TMEM54Q969K7 222 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 MARS2Q96GW9 593 aaKnown RBP13.18□□□□□ -0.3
CLN8-209ENST00000635970 ULBP2Q9BZM5 246 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 SIRT7Q9NRC8 400 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 PIGLQ9Y2B2 252 aa13.18□□□□□ -0.3
CLN8-209ENST00000635970 HSPA12AO43301 675 aa13.17□□□□□ -0.3
CLN8-209ENST00000635970 GABRR1P24046 479 aa13.17□□□□□ -0.3
CLN8-209ENST00000635970 RPS23P62266 143 aaKnown RBP13.17□□□□□ -0.3
CLN8-209ENST00000635970 OR8B8Q15620 311 aa13.17□□□□□ -0.3
CLN8-209ENST00000635970 GABRA6Q16445 453 aa13.17□□□□□ -0.3
CLN8-209ENST00000635970 ASCL4Q6XD76 172 aa13.17□□□□□ -0.3
CLN8-209ENST00000635970 SPTSSAQ969W0 71 aa13.17□□□□□ -0.3
CLN8-209ENST00000635970 MSI2Q96DH6 328 aaKnown RBP13.17□□□□□ -0.3
CLN8-209ENST00000635970 GGACTQ9BVM4 153 aa13.17□□□□□ -0.3
CLN8-209ENST00000635970 RBFOX3A6NFN3 312 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 ARG1P05089 322 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 FAHP16930 419 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 OR2B8PP59922 312 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 CNN3Q15417 329 aaKnown RBP13.16□□□□□ -0.3
CLN8-209ENST00000635970 OR4D5Q8NGN0 318 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 OR13D1Q8NGV5 346 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms