RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 ISYNA1Q9NPH2 558 aa14.59□□□□□ -0.07
CLN6-210ENST00000635747 GFOD1Q9NXC2 390 aa14.59□□□□□ -0.07
CLN6-210ENST00000635747 MOB4Q9Y3A3 225 aa14.59□□□□□ -0.07
CLN6-210ENST00000635747 KCNAB3O43448 404 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 RGS10O43665 173 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 SC5DO75845 299 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 LPLP06858 475 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 IL3RAP26951 378 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 ZNF816Q0VGE8 651 aaPredicted RBP14.58□□□□□ -0.08
CLN6-210ENST00000635747 HES1Q14469 280 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 NSUN5P1Q3KNT7 163 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 RBM48Q5RL73 367 aaKnown RBP14.58□□□□□ -0.08
CLN6-210ENST00000635747 ZNF554Q86TJ5 538 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 DRAM1Q8N682 238 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 OR4F17Q8NGA8 305 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 OR5AU1Q8NGC0 362 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 OR56B4Q8NH76 319 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 OR4F4Q96R69 305 aa14.58□□□□□ -0.08
CLN6-210ENST00000635747 NOTCH1P46531 2555 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 A0A1W2PPI3 338 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 CCRL2O00421 344 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 PDCD6O75340 191 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 SNRNP70P08621 437 aaKnown RBP14.57□□□□□ -0.08
CLN6-210ENST00000635747 UCHL1P09936 223 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 PSMA1P25786 263 aaKnown RBP14.57□□□□□ -0.08
CLN6-210ENST00000635747 RANBP1P43487 201 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 LOXL3P58215 753 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 TPBGQ13641 420 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 INSL4Q14641 139 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 C1orf100Q5SVJ3 147 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 LIPKQ5VXJ0 399 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 LRRTM1Q86UE6 522 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 KCNG3Q8TAE7 436 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 KCNIP1Q9NZI2 227 aa14.57□□□□□ -0.08
CLN6-210ENST00000635747 C12orf77C9JDV5 145 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 HSD17B6O14756 317 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 FGF16O43320 207 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 DENRO43583 198 aaKnown RBP14.56□□□□□ -0.08
CLN6-210ENST00000635747 MPIG6BO95866 241 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 AMY1AP04745 511 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 AMY2AP04746 511 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 HSMCR30P0CW71 290 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 TMEM11P17152 192 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 CRHBPP24387 322 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 GP2P55259 537 aaKnown RBP14.56□□□□□ -0.08
CLN6-210ENST00000635747 TMEM95Q3KNT9 176 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 PDLIM3Q53GG5 364 aaPredicted RBP14.56□□□□□ -0.08
CLN6-210ENST00000635747 FAM27D1Q5T7N8 215 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 STEAP3Q658P3 488 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 PRSS48Q7RTY5 328 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 OR4K15Q8NH41 348 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 SGCDQ92629 289 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 FAM46BQ96A09 425 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 NEDD4LQ96PU5 975 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 CITED2Q99967 270 aaPredicted RBP14.56□□□□□ -0.08
CLN6-210ENST00000635747 CCDC90BQ9GZT6 254 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 GNG12Q9UBI6 72 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 BLOC1S6Q9UL45 172 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 LRRC42Q9Y546 428 aa14.56□□□□□ -0.08
CLN6-210ENST00000635747 A0A1W2PPE3 182 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 TXNL1O43396 289 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 ARL6IP5O75915 188 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 HBZP02008 142 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 CD37P11049 281 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 HTR2CP28335 458 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 CD83Q01151 205 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 MLLT11Q13015 90 aaPredicted RBP14.55□□□□□ -0.08
CLN6-210ENST00000635747 C9orf152Q5JTZ5 239 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 SIGIRRQ6IA17 410 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 MOB3BQ86TA1 216 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 OR4X2Q8NGF9 303 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 TMEM59Q9BXS4 323 aa14.55□□□□□ -0.08
CLN6-210ENST00000635747 MBNL3Q9NUK0 354 aaKnown RBP14.55□□□□□ -0.08
CLN6-210ENST00000635747 IGHV3-43A0A0B4J1X8 118 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 IGHV1-3A0A0C4DH29 117 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 UBE2QL1A1L167 161 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 SLC22A1O15245 554 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 BPNT1O95861 308 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 IGHV3-43DP0DP04 118 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 VSIG8P0DPA2 414 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 CPEP16870 476 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 RPS27AP62979 156 aaKnown RBP14.54□□□□□ -0.08
CLN6-210ENST00000635747 EBI3Q14213 229 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 DIAPH2-AS1Q14236 149 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 SLC25A48Q6ZT89 311 aaKnown RBP14.54□□□□□ -0.08
CLN6-210ENST00000635747 PRR18Q8N4B5 295 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 OR6M1Q8NGM8 313 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 UBALD1Q8TB05 177 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 TMEM203Q969S6 136 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 R3HDM4Q96D70 268 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 TAF9BQ9HBM6 251 aa14.54□□□□□ -0.08
CLN6-210ENST00000635747 IGKV1D-33P01593 117 aa14.53□□□□□ -0.08
CLN6-210ENST00000635747 IGKV1-33P01594 117 aa14.53□□□□□ -0.08
CLN6-210ENST00000635747 RCC1P18754 421 aaPredicted RBP14.53□□□□□ -0.08
CLN6-210ENST00000635747 ZNF137PP52743 207 aa14.53□□□□□ -0.08
CLN6-210ENST00000635747 HNF4GQ14541 408 aa14.53□□□□□ -0.08
CLN6-210ENST00000635747 FBLN7Q53RD9 439 aa14.53□□□□□ -0.08
CLN6-210ENST00000635747 HIST2H2BDQ6DRA6 164 aa14.53□□□□□ -0.08
CLN6-210ENST00000635747 IZUMO1Q8IYV9 350 aa14.53□□□□□ -0.08
CLN6-210ENST00000635747 LYG1Q8N1E2 194 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms