RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 LRP10Q7Z4F1 713 aa15.31■□□□□ 0.04
CACNA1A-215ENST00000635727 PP6455Q8WZ26 134 aa15.31■□□□□ 0.04
CACNA1A-215ENST00000635727 OPN3Q9H1Y3 402 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-215ENST00000635727 ALX3O95076 343 aa15.31■□□□□ 0.04
CACNA1A-215ENST00000635727 CCL4P13236 92 aa15.31■□□□□ 0.04
CACNA1A-215ENST00000635727 TMEM38BQ9NVV0 291 aa15.31■□□□□ 0.04
CACNA1A-215ENST00000635727 PIK3C2AO00443 1686 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 LMO7DNF2Z398 122 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 HOXB3P14651 431 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 FAHD1Q6P587 224 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 FRRS1LQ9P0K9 344 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 PRSS50Q9UI38 385 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 ZFP30Q9Y2G7 519 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 KBTBD11O94819 623 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 SFT2D2O95562 160 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 MBNL2Q5VZF2 373 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 WDFY1Q8IWB7 410 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 PAXXQ9BUH6 204 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 HMX2A2RU54 273 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 SLC25A19Q9HC21 320 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 CCL28Q9NRJ3 127 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 PIPOXQ9P0Z9 390 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 SERGEFQ9UGK8 458 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 SOCS1O15524 211 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 PGA3P0DJD8 388 aa15.3■□□□□ 0.04
CACNA1A-215ENST00000635727 GPX2P18283 190 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 YBX1P67809 324 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 ACVR1Q04771 509 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 LINC00470Q9BZP3 86 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 HSPB1P04792 205 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 LRRC75BQ2VPJ9 315 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 OR1P1Q8NH06 330 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 OR4A5Q8NH83 315 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 CNRIP1Q96F85 164 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 TMEM238LA0A1B0GVL6 79 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 A6NJY4 79 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 PDE6DO43924 150 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 CLDN14O95500 239 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 HIST1H1BP16401 226 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 DHRS2Q13268 280 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 SPEM1Q8N4L4 309 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 C11orf44Q8N8P7 122 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 HEXA-AS1Q9H8Q6 139 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 CKAP5Q14008 2032 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 LAMA4Q16363 1823 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 TCRBV16S1A1N1A0A5B0 115 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 ISLRO14498 428 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 GPR6P46095 362 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 CDX1P47902 265 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 TMEM33P57088 247 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 RNF7Q9UBF6 113 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 GAGE10A6NGK3 116 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 HMGA1P17096 107 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 CX3CL1P78423 397 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 MANBALQ9NQG1 85 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 SIRT7Q9NRC8 400 aa15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 ZFC3H1O60293 1989 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-215ENST00000635727 LTBRP36941 435 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 ASCL5Q7RTU5 278 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 J3QR06 171 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 ST6GALNAC3Q8NDV1 305 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 SHPRHQ149N8 1683 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 CIRBPQ14011 172 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 FXYD3Q14802 87 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 OR8D4Q8NGM9 314 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 TRAV21A0A0B4J279 112 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 OR2A4O95047 310 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 PRB3Q04118 309 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 SPSB1Q96BD6 273 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 WFIKKN1Q96NZ8 548 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 OR2A7Q96R45 310 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 GPX1P07203 203 aa15.28■□□□□ 0.04
CACNA1A-215ENST00000635727 MON2Q7Z3U7 1717 aa15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 HLA-DRB3P79483 266 aa15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 RBFOX2O43251 390 aaKnown RBP eCLIP15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 GAPDHP04406 335 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 ISL1P61371 349 aa15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 NTMQ9P121 344 aa15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 LPAR3Q9UBY5 353 aa15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 TUBD1Q9UJT1 453 aa15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 MTCL1Q9Y4B5 1905 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 CYB5R3P00387 301 aaPredicted RBP15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 TDGF1P13385 188 aa15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 SPATA45Q537H7 98 aa15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 UNQ5815/PRO19632Q6UWF5 114 aa15.27■□□□□ 0.04
CACNA1A-215ENST00000635727 A0A0A6YYD5 115 aa15.27■□□□□ 0.03
CACNA1A-215ENST00000635727 FAM53BQ14153 422 aa15.27■□□□□ 0.03
CACNA1A-215ENST00000635727 UCN2Q96RP3 112 aa15.27■□□□□ 0.03
CACNA1A-215ENST00000635727 PLPP3O14495 311 aa15.27■□□□□ 0.03
CACNA1A-215ENST00000635727 RPL31P62899 125 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-215ENST00000635727 MBPP02686 304 aaPredicted RBP15.27■□□□□ 0.03
CACNA1A-215ENST00000635727 RAX2Q96IS3 184 aa15.27■□□□□ 0.03
CACNA1A-215ENST00000635727 GPR82Q96P67 336 aa15.27■□□□□ 0.03
CACNA1A-215ENST00000635727 hCG_38984A0A1B0GV85 526 aa15.26■□□□□ 0.03
CACNA1A-215ENST00000635727 SIGLEC5O15389 551 aa15.26■□□□□ 0.03
CACNA1A-215ENST00000635727 SIGLEC14Q08ET2 396 aa15.26■□□□□ 0.03
CACNA1A-215ENST00000635727 C10orf126Q8N4M7 172 aa15.26■□□□□ 0.03
CACNA1A-215ENST00000635727 Q9N2K0 584 aa15.26■□□□□ 0.03
CACNA1A-215ENST00000635727 TNFRSF12AQ9NP84 129 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms