RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 TNFRSF9Q07011 255 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 KRTAP27-1Q3LI81 207 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 ANKRD39Q53RE8 183 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 NMSQ5H8A3 153 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 LYZL2Q7Z4W2 148 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 ABHD12BQ7Z5M8 362 aaPredicted RBP6.59□□□□□ -1.35
SSRP1-205ENST00000635721 KIR2DL5AQ8N109 375 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 GPR137CQ8N3F9 429 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 CYB561D1Q8N8Q1 229 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 GJC3Q8NFK1 279 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 OR51G1Q8NGK1 321 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 OR4X1Q8NH49 305 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 TMEM18Q96B42 140 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 GPER1Q99527 375 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 ATP5SQ99766 215 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 SOX7Q9BT81 388 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 CABLES2Q9BTV7 478 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 SH3BGRL3Q9H299 93 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 BANF2Q9H503 90 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 ZNF286AQ9HBT8 521 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 Q9N2K0 584 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 SH2D2AQ9NP31 389 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 PLEKHJ1Q9NW61 149 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 ZNF319Q9P2F9 582 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 NAT8Q9UHE5 227 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 MCTS1Q9ULC4 181 aaKnown RBP6.59□□□□□ -1.35
SSRP1-205ENST00000635721 RNF115Q9Y4L5 304 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 LAMA5O15230 3695 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 FRYQ5TBA9 3013 aa6.59□□□□□ -1.35
SSRP1-205ENST00000635721 IGKV1D-8A0A087WSZ0 117 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 TRBV6-6A0A0A6YYG2 114 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 A0A0G2JMM0 328 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 C3orf85A0A1B0GTC6 90 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 A0A1W2PPB8 328 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 A0A1W2PRS3 328 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 IGSF23A1L1A6 192 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 ZNF727A8MUV8 499 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 KIR3DP1A8MWS1 328 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 H3BSH0 61 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 TRAF3IP2O43734 574 aaPredicted RBP6.58□□□□□ -1.36
SSRP1-205ENST00000635721 TUSC2O75896 110 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 MMP23AO75900 390 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 NEURL1O76050 574 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 VAMP5O95183 116 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 WISP1O95388 367 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 DIRAS3O95661 229 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 IL18BPO95998 194 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 HLA-DOBP13765 273 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 FABP4P15090 132 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 RRADP55042 308 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 TMPRSS3P57727 454 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 RANP62826 216 aaKnown RBP6.58□□□□□ -1.36
SSRP1-205ENST00000635721 AKIRIN2Q53H80 203 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 PRAMEF20Q5VT98 475 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 WDR25Q64LD2 544 aaPredicted RBP6.58□□□□□ -1.36
SSRP1-205ENST00000635721 CDPF1Q6NVV7 123 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 CLEC9AQ6UXN8 241 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 TMEM182Q6ZP80 229 aaPredicted RBP6.58□□□□□ -1.36
SSRP1-205ENST00000635721 LHFPL2Q6ZUX7 228 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 C1QL2Q7Z5L3 287 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 LINC00346Q8IVM7 164 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 UEVLDQ8IX04 471 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 ODF3L1Q8IXM7 274 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 SAXO1Q8IYX7 474 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 CMTM1Q8IZ96 169 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 SELENOHQ8IZQ5 122 aaKnown RBP6.58□□□□□ -1.36
SSRP1-205ENST00000635721 OR52M1Q8NGK5 317 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 OR5D13Q8NGL4 314 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 LSM10Q969L4 123 aaKnown RBP6.58□□□□□ -1.36
SSRP1-205ENST00000635721 SPACA9Q96E40 222 aaPredicted RBP6.58□□□□□ -1.36
SSRP1-205ENST00000635721 C20orf144Q9BQM9 153 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 SMIM3Q9BZL3 60 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 LIME1Q9H400 295 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 RIMS4Q9H426 269 aaPredicted RBP6.58□□□□□ -1.36
SSRP1-205ENST00000635721 PLK3Q9H4B4 646 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 PRORYQ9H606 182 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 DEPPQ9NTK1 212 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 LIPGQ9Y5X9 500 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 CHCHD2Q9Y6H1 151 aaPredicted RBP6.58□□□□□ -1.36
SSRP1-205ENST00000635721 MYO7BQ6PIF6 2116 aa6.58□□□□□ -1.36
SSRP1-205ENST00000635721 BSNQ9UPA5 3926 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 SHANK1Q9Y566 2161 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 KIAA1324LA8MWY0 1029 aaPredicted RBP6.57□□□□□ -1.36
SSRP1-205ENST00000635721 FAM90A26D6RGX4 464 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 MSTNO14793 375 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 C1QL1O75973 258 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 WISP2O76076 250 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 BIDP55957 195 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 CLDN15P56746 228 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 UBE2NP61088 152 aaKnown RBP6.57□□□□□ -1.36
SSRP1-205ENST00000635721 POU3F1Q03052 451 aaPredicted RBP6.57□□□□□ -1.36
SSRP1-205ENST00000635721 FMODQ06828 376 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 FOXL1Q12952 345 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 MFAP5Q13361 173 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 CNN3Q15417 329 aaKnown RBP6.57□□□□□ -1.36
SSRP1-205ENST00000635721 OR1C1Q15619 314 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 ABHD17BQ5VST6 288 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 GFI1BQ5VTD9 330 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 ZNF343Q6P1L6 599 aa6.57□□□□□ -1.36
SSRP1-205ENST00000635721 IGFL2Q6UWQ7 119 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms