RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ATP5SQ99766 215 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 RNF5Q99942 180 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CHAC1Q9BUX1 264 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 C1orf50Q9BV19 199 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 FAIM2Q9BWQ8 316 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 REG4Q9BYZ8 158 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 DSN1Q9H410 356 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ANKRD19PQ9H560 264 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 RPP21Q9H633 154 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 METTL7AQ9H8H3 244 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 WDR54Q9H977 334 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 UCK1Q9HA47 277 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 MRM3Q9HC36 420 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 LZTFL1Q9NQ48 299 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TREX1Q9NSU2 369 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 C20orf96Q9NUD7 363 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PARVAQ9NVD7 372 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC2A8Q9NY64 477 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TAS2R1Q9NYW7 299 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 UBAP1Q9NZ09 502 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 MED11Q9P086 117 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PDP1Q9P0J1 537 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PSMC3IPQ9P2W1 217 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 NXT1Q9UKK6 140 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CFAP45Q9UL16 551 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 BOKQ9UMX3 212 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ANGPT4Q9Y264 503 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC22A14Q9Y267 594 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ST3GAL6Q9Y274 331 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PPIL1Q9Y3C6 166 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PEX16Q9Y5Y5 336 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 KCNE3Q9Y6H6 103 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 FCGBPQ9Y6R7 5405 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 UBR4Q5T4S7 5183 aa0.59□□□□□ -2.32
SMARCB1-209ENST00000635578 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
SMARCB1-209ENST00000635578 DNAH7Q8WXX0 4024 aa0.59□□□□□ -2.32
SMARCB1-209ENST00000635578 KIAA1109Q2LD37 5005 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TENM2Q9NT68 2774 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 DNAH6Q9C0G6 4158 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CSMD3Q7Z407 3707 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 IGHV3OR15-7A0A075B7D8 119 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 KCNE1BA0A087WTH5 132 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 A0A0A6YYD5 115 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 IGHV1-18A0A0C4DH31 117 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 IGKV2-24A0A0C4DH68 120 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 A0A0J9YW62 118 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 KIR2DS1A0A191URI9 304 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SPRR5A0A1B0GTR4 108 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TMEM72A0PK05 275 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 C5orf63A6NC05 138 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SYCE1LA8MT33 242 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 A8MT66 165 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 B4DSR2 109 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 NDUFC2-KCTD14E9PQ53 114 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 H3BSH0 61 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 K7EIL1 84 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 hCG_2039718K7EN88 272 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 LGALS9O00182 355 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 MANBAO00462 879 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 KPNA4O00629 521 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 DNALI1O14645 258 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 BCKDKO14874 412 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RAB29O14966 203 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TOX3O15405 576 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PIN1P1O15428 100 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 NUPL2O15504 423 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TCF21O43680 179 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CHST1O43916 411 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 EIF1BO60739 113 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SHOX2O60902 331 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 DEDDO75618 318 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 REM1O75628 298 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 FCN3O75636 299 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC22A5O76082 557 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 YIF1AO95070 293 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TTC4O95801 387 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SERPINA3P01011 423 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PDYNP01213 254 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CD8AP01732 235 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 C1QAP02745 245 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SERPINA5P05154 406 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RPS17P08708 135 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CD3GP09693 182 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ACSM4P0C7M7 580 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR8U9P0C7N5 309 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CECR9P0C854 216 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC35E2BP0CK96 405 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 MPC1LP0DKB6 136 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RALBP11234 206 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PSKH1P11801 424 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RAB3AP20336 220 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ME2P23368 584 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RPS3P23396 243 aaKnown RBP eCLIP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 IL32P24001 234 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 IL12BP29460 328 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 EVI2BP34910 448 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 UGT2B10P36537 528 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TGFBR1P36897 503 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 MPV17P39210 176 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CD79BP40259 229 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms