RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 FZR1Q9UM11 496 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 UBE2J1Q9Y385 318 aaPredicted RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 FRYQ5TBA9 3013 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 APC2O95996 2303 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ACACAQ13085 2346 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 CADP27708 2225 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 hCG_1807616A0A1W2PRN6 198 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 NKX2-6A6NCS4 301 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 MFSD2BA6NFX1 497 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 MSGN1A6NI15 193 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 A6NLC8 198 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 VSTM5A8MXK1 200 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 C3orf80F5H4A9 247 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 K7EPK0 472 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 HSD17B6O14756 317 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 WNT9BO14905 357 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 SHOXO15266 292 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 ZNF737O75373 536 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 SPDEFO95238 335 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 IGLV2-14P01704 120 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 GAPDHP04406 335 aaKnown RBP4.67□□□□□ -1.66
NEK3-211ENST00000629912 ADH4P08319 380 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 PSG2P11465 335 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 GZMHP20718 246 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 VDAC1P21796 283 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 RPL12P30050 165 aaKnown RBP4.67□□□□□ -1.66
NEK3-211ENST00000629912 CEACAM6P40199 344 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 OR3A1P47881 315 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 P2RX3P56373 397 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 HTD2P86397 168 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 COL10A1Q03692 680 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 SNTB1Q13884 538 aaKnown RBP4.67□□□□□ -1.66
NEK3-211ENST00000629912 NMSQ5H8A3 153 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 BEX5Q5H9J7 111 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 C6orf183Q5T699 404 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
NEK3-211ENST00000629912 PRAMEF6Q5VXH4 476 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 TMEM108Q6UXF1 575 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 C22orf34Q6ZV56 151 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 HSD17B13Q7Z5P4 300 aaPredicted RBP4.67□□□□□ -1.66
NEK3-211ENST00000629912 CD177Q8N6Q3 437 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 SLC35G3Q8N808 338 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 DMBX1Q8NFW5 382 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 OR2Z1Q8NG97 314 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 PPP1R35Q8TAP8 253 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 Q8TCH9 128 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 FAM222BQ8WU58 562 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 LRRC29Q8WV35 223 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 RBPMSQ93062 196 aaKnown RBP4.67□□□□□ -1.66
NEK3-211ENST00000629912 LSM10Q969L4 123 aaKnown RBP4.67□□□□□ -1.66
NEK3-211ENST00000629912 GALMQ96C23 342 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 MEGF10Q96KG7 1140 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 SNX22Q96L94 193 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 DIRC2Q96SL1 478 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 VKORC1Q9BQB6 163 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 ARV1Q9H2C2 271 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 C11orf1Q9H5F2 150 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 FAM212BQ9NTI7 297 aaPredicted RBP4.67□□□□□ -1.66
NEK3-211ENST00000629912 UFSP2Q9NUQ7 469 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 ASF1BQ9NVP2 202 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 OR14J1Q9UGF5 321 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 IL19Q9UHD0 177 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 PFDN2Q9UHV9 154 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 POMT1Q9Y6A1 747 aa4.67□□□□□ -1.66
NEK3-211ENST00000629912 IGKV1D-17A0A075B6S4 117 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 TRAV39A0A0B4J263 110 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 A0A1B0GU03 582 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 DPRXA6NFQ7 191 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 ZSCAN5BA6NJL1 495 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 RNF212BA8MTL3 300 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 A8MXK9 166 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 NUDT19A8MXV4 375 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 C12orf77C9JDV5 145 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 C15orf65H3BRN8 121 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 MGST3O14880 152 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 HSPA12AO43301 675 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 KCNAB3O43448 404 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 GPR137BO60478 399 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 PITX3O75364 302 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 JTBO76095 146 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 HBZP02008 142 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 THBDP07204 575 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 CD55P08174 381 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 FGF2P09038 288 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 FAM157CP0CG43 387 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 CGB3P0DN86 165 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 CGB7P0DN87 165 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 BMP5P22003 454 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 TNFSF4P23510 183 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 TMEM33P57088 247 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 S100A10P60903 97 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 AESQ08117 197 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 EIF4EBP1Q13541 118 aaPredicted RBP4.66□□□□□ -1.66
NEK3-211ENST00000629912 KRBOX4Q5JUW0 171 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 EIF5AL1Q6IS14 154 aaKnown RBP4.66□□□□□ -1.66
NEK3-211ENST00000629912 GCSAMQ8N6F7 178 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 TCTEX1D1Q8N7M0 179 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 UBAC2Q8NBM4 344 aa4.66□□□□□ -1.66
NEK3-211ENST00000629912 RELL2Q8NC24 303 aaPredicted RBP4.66□□□□□ -1.66
NEK3-211ENST00000629912 OR52M1Q8NGK5 317 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms