RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 EIF4EP06730 217 aaKnown RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 KRTDAPP60985 99 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SHHQ15465 462 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 C12orf73Q69YU5 71 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM207Q6UWW9 146 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SCD5Q86SK9 330 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 OR2M3Q8NG83 312 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 OR5P2Q8WZ92 322 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 EEF1AKMT3Q96AZ1 226 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 MRPS18AQ9NVS2 196 aaKnown RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 RBM22Q9NW64 420 aaKnown RBP eCLIP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 TMED7Q9Y3B3 224 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 COL11A1P12107 1806 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 IGHV1-69-2A0A0G2JMI3 117 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 C9JAW5 83 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 M0R129 80 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 IL3P08700 152 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 PRSS56P0CW18 603 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FABP2P12104 132 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 IDSP22304 550 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 TSFMP43897 325 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 MRPS6P82932 125 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FZD5Q13467 585 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ANXA2RQ3ZCQ2 193 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SFRP4Q6FHJ7 346 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 HMGN2P46Q86SG4 172 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ACOT4Q8N9L9 421 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 CD99L2Q8TCZ2 262 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 THEM6Q8WUY1 208 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 MS4A6AQ9H2W1 248 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 NKX2-4Q9H2Z4 354 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 WSB2Q9NYS7 404 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 HIGD1AQ9Y241 93 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 NBEAQ8NFP9 2946 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 COL2A1P02458 1487 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM90A20PA6NIJ5 464 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FGF16O43320 207 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SNCGO76070 127 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 CD160O95971 181 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 B3GALT4O96024 378 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 HOXB9P17482 250 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ADCYAP1P18509 176 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 PRDX3P30048 256 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF121P58317 390 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM3BP58499 235 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 CATR1Q13166 79 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 MS4A18Q3C1V0 323 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SFXN4Q6P4A7 337 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 CD300LDQ6UXZ3 194 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 KRTCAP2Q8N6L1 136 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FNDC9Q8TBE3 224 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ABHD5Q8WTS1 349 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SUSD6Q92537 303 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FRZBQ92765 325 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 TM4SF18Q96CE8 201 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SLAMF6Q96DU3 332 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ZMYND19Q96E35 227 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 S100A16Q96FQ6 103 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 PBX4Q9BYU1 374 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 CA10Q9NS85 328 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 MARCH5Q9NX47 278 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 NAT8BQ9UHF3 227 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FOXA2Q9Y261 457 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ZBTB42B2RXF5 422 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 IDSB3KWA1 339 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 B4DEV8 164 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 GABARAPH6UMI1 98 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 NDUFC2O95298 119 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 OR2H2O95918 312 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 WNT1P04628 370 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF286BP0CG31 522 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 PGA4P0DJD7 388 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 PGA5P0DJD9 388 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 CPMP14384 443 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 PAX1P15863 534 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 HTR1DP28221 377 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 KIR2DL2P43627 348 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 RPL31P62899 125 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 RPL8P62917 257 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 DGCR2P98153 550 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 PCOLCEQ15113 449 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 LRRC37A5PQ49AS3 106 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST2H2BCQ6DN03 193 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST2H2BDQ6DRA6 164 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 BTNL8Q6UX41 500 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 OR13A1Q8NGR1 328 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 DOK4Q8TEW6 326 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 GPR146Q96CH1 333 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 SCARF2Q96GP6 870 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 COQ2Q96H96 371 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FBXL15Q9H469 300 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 EDA2RQ9HAV5 297 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 GP6Q9HCN6 339 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 GNG13Q9P2W3 67 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 TIMM10BQ9Y5J6 103 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ENPP4Q9Y6X5 453 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 ATG2AQ2TAZ0 1938 aa3.38□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM90A7PA6NKC0 464 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms