RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 CCRL2O00421 344 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 SC5DO75845 299 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 GAPDHP04406 335 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 UBBP0CG47 229 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 TMEM11P17152 192 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 FUT3P21217 361 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 IL3RAP26951 378 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 LOXL3P58215 753 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 SLC35A2P78381 396 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 CD83Q01151 205 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 DIAPH2-AS1Q14236 149 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 MED22Q15528 200 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 C9orf152Q5JTZ5 239 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 RBM48Q5RL73 367 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 GLT8D1Q68CQ7 371 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 GAPTQ8N292 157 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 OR4X2Q8NGF9 303 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 UBALD1Q8TB05 177 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 NRG4Q8WWG1 115 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 PHYHIPQ92561 330 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 TPRKBQ9Y3C4 175 aa13.69□□□□□ -0.22
SPTAN1-214ENST00000628614 C12orf77C9JDV5 145 aa13.68□□□□□ -0.22
SPTAN1-214ENST00000628614 INSL4Q14641 139 aa13.68□□□□□ -0.22
SPTAN1-214ENST00000628614 UFD1Q92890 307 aa13.68□□□□□ -0.22
SPTAN1-214ENST00000628614 FAM46BQ96A09 425 aa13.68□□□□□ -0.22
SPTAN1-214ENST00000628614 VCX3BQ9H321 246 aa13.68□□□□□ -0.22
SPTAN1-214ENST00000628614 IGHV3-43A0A0B4J1X8 118 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 IGHV1-3A0A0C4DH29 117 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 SH2D7A6NKC9 451 aaPredicted RBP13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 G3V4G9 280 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 FGF16O43320 207 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 PDCD6O75340 191 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 IGKV1D-33P01593 117 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 IGKV1-33P01594 117 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 IGHV3-43DP0DP04 118 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 MYF6P23409 242 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 IRF3Q14653 427 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 HSD17B12Q53GQ0 312 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 FAM27D1Q5T7N8 215 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 SAMD5Q5TGI4 173 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 SIGIRRQ6IA17 410 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 MOB3BQ86TA1 216 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 C5orf56Q8N8D9 126 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 OR4K15Q8NH41 348 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 ANKRD60Q9BZ19 345 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 GNG12Q9UBI6 72 aa13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 TSSC4Q9Y5U2 329 aaPredicted RBP13.67□□□□□ -0.22
SPTAN1-214ENST00000628614 TXNL1O43396 289 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 MPIG6BO95866 241 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 HBZP02008 142 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 SRMP19623 302 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 VHLP40337 213 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 REG1BP48304 166 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 GP2P55259 537 aaKnown RBP13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 HNF4GQ14541 408 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 BEAN1Q3B7T3 259 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 CEACAM19Q7Z692 300 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 ZNF554Q86TJ5 538 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 LRRTM1Q86UE6 522 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 IZUMO1Q8IYV9 350 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 PRR18Q8N4B5 295 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 SGCDQ92629 289 aa13.66□□□□□ -0.22
SPTAN1-214ENST00000628614 A0A1W2PRX2 142 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 TCRBV4S1A1TA0A5B7 111 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 UBE2QL1A1L167 161 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 RGS10O43665 173 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 UCHL1P09936 223 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 PF4V1P10720 104 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 RCC1P18754 421 aaPredicted RBP13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 EBI3Q14213 229 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 TCTEX1D4Q5JR98 221 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 C1orf100Q5SVJ3 147 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 KPRPQ5T749 579 aaPredicted RBP13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 LIPKQ5VXJ0 399 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 SLC25A48Q6ZT89 311 aaKnown RBP13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 ZNF439Q8NDP4 499 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 RTN4IP1Q8WWV3 396 aaPredicted RBP13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 NEDD4LQ96PU5 975 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 TMEM59Q9BXS4 323 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 DUSP21Q9H596 190 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 TAF9BQ9HBM6 251 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 KCNIP1Q9NZI2 227 aa13.65□□□□□ -0.22
SPTAN1-214ENST00000628614 HSMCR30P0CW71 290 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 VSIG8P0DPA2 414 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 HTR2CP28335 458 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 HSPA13P48723 471 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 ZNF137PP52743 207 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 RPS27AP62979 156 aaKnown RBP13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 TRAM1Q15629 374 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 NKAPLQ5M9Q1 402 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 STEAP3Q658P3 488 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 OR10V1Q8NGI7 309 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 OR2T10Q8NGZ9 312 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 OR1L1Q8NH94 360 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 KCNG3Q8TAE7 436 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 ST6GALNAC6Q969X2 333 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 ISYNA1Q9NPH2 558 aa13.64□□□□□ -0.23
SPTAN1-214ENST00000628614 IGHV3-72A0A0B4J1Y9 119 aa13.63□□□□□ -0.23
SPTAN1-214ENST00000628614 PSMB11A5LHX3 300 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms