RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 MMP24Q9Y5R2 645 aa11.28□□□□□ -0.6
PCDHGC3-208ENST00000622836 IGHV3-43A0A0B4J1X8 118 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 C15orf65H3BRN8 121 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 RRP9O43818 475 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 TNFAIP8O95379 198 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 IGHV3-43DP0DP04 118 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 CHATP28329 748 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 MNDAP41218 407 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 QRFPP83859 136 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 C2orf76Q3KRA6 126 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 UTF1Q5T230 341 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 TPTE2P1Q5T6R2 138 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 CCDC144NLQ6NUI1 221 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 SHISA2Q6UWI4 295 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 SLC16A12Q6ZSM3 486 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 TMEM219Q86XT9 240 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 OR10X1Q8NGY0 326 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 PIFOQ8TCI5 191 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 TOMM40LQ969M1 308 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 SULT4A1Q9BR01 284 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 NPFFR1Q9GZQ6 430 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 LPAR5Q9H1C0 372 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 TXNL4BQ9NX01 149 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 GNG12Q9UBI6 72 aa11.27□□□□□ -0.61
PCDHGC3-208ENST00000622836 A0A1W2PPE3 182 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 SHISA3A0PJX4 238 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 SMIM30A4D0T7 59 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 IFITM5A6NNB3 132 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 C12orf77C9JDV5 145 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 VEGFCP49767 419 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 DYNLT3P51808 116 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 MADCAM1Q13477 382 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 TSPAN14Q8NG11 270 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 OR52M1Q8NGK5 317 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 SETD6Q8TBK2 473 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 MRPL30Q8TCC3 161 aaKnown RBP11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 CAPSLQ8WWF8 208 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 CHCHD6Q9BRQ6 235 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 TAF9BQ9HBM6 251 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 GFOD1Q9NXC2 390 aa11.26□□□□□ -0.61
PCDHGC3-208ENST00000622836 A0A087WXM4 84 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 A0A0A6YYD4 124 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 LOC100506127A0A0U1RQW1 187 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 TMEM272A0A1B0GTI8 110 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 OOSP1A8MZH6 123 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 SOCS1O15524 211 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 CHST1O43916 411 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 TSPAN9O75954 239 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 HBZP02008 142 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 CD36P16671 472 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 FGF9P31371 208 aaPredicted RBP11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 GAPTQ8N292 157 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 DTX3Q8N9I9 347 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 OR56B1Q8NGI3 324 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 OR10V1Q8NGI7 309 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 OR1L1Q8NH94 360 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 CYYR1Q96J86 154 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 KCTD7Q96MP8 289 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 OR51E2Q9H255 320 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 LIN7BQ9HAP6 207 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 RAB22AQ9UL26 194 aa11.25□□□□□ -0.61
PCDHGC3-208ENST00000622836 A6NDX4 124 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 CD24P25063 80 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 IL3RAP26951 378 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 MRPS15P82914 257 aaKnown RBP11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 CCBE1Q6UXH8 406 aaPredicted RBP11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 Q6ZTK2 550 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 TPRA1Q86W33 373 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 OR2T6Q8NHC8 308 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 GALMQ96C23 342 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 AKR1E2Q96JD6 320 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 C16orf95Q9H693 158 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 RANBP3Q9H6Z4 567 aaPredicted RBP11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 OR2S2Q9NQN1 319 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 MBNL3Q9NUK0 354 aaKnown RBP11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 ABRACLQ9P1F3 81 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 FBLN5Q9UBX5 448 aa11.24□□□□□ -0.61
PCDHGC3-208ENST00000622836 ANK2Q01484 3957 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 A0A0B4J203 849 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 NOTOA8MTQ0 251 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 LY6LH3BQJ8 138 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 GADD45AP24522 165 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 RAB7AP51149 207 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 LOXL3P58215 753 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 MXD1Q05195 221 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 FAM53AQ6NSI3 398 aaPredicted RBP11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 MOB1BQ7L9L4 216 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 ZNF554Q86TJ5 538 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 FAM89BQ8N5H3 189 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 IL1F10Q8WWZ1 152 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 ARHGAP5-AS1Q96IT6 56 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 OCSTAMPQ9BR26 566 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 RIMS4Q9H426 269 aaPredicted RBP11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 AK3Q9UIJ7 227 aa11.23□□□□□ -0.61
PCDHGC3-208ENST00000622836 HSF4Q9ULV5 492 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms