RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ZNF154Q13106 437 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 EIF2S3LQ2VIR3 472 aaKnown RBP8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 KHDC3LQ587J8 217 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 OR2T2Q6IF00 324 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 ZNF497Q6ZNH5 498 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 LINC00696Q6ZRV3 163 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 MDP1Q86V88 176 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 CD300LFQ8TDQ1 290 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 MBD3L1Q8WWY6 194 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 LOXL4Q96JB6 756 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 FER1L6-AS2Q96M78 137 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 ARRDC1-AS1Q9H2J1 176 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 ERRFI1Q9UJM3 462 aaPredicted RBP8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 COLQQ9Y215 455 aaPredicted RBP8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 WIPI2Q9Y4P8 454 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 WSB1Q9Y6I7 421 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 XIRP2A4UGR9 3374 aa8.16□□□□□ -1.1
IGHV3-54-201ENST00000622166 LOC102723971A0A1B0GUV8 181 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 MED19A0JLT2 244 aaPredicted RBP8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 CDRT15L2A8MXV6 281 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 SLC33A1O00400 549 aaPredicted RBP8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 GPR37O15354 613 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 PPIHO43447 177 aaKnown RBP8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 TNFSF12O43508 249 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 RHBDL1O75783 438 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 EIF3GO75821 320 aaKnown RBP eCLIP8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 CNOT4O95628 575 aaKnown RBP8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 IFNA5P01569 189 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 IGLV2-14P01704 120 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 IGHV2-5P01817 119 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 SERPINE2P07093 398 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 PGA5P0DJD9 388 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 PSG2P11465 335 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 DAOP14920 347 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 CD46P15529 392 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 CA6P23280 308 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 RPS23P62266 143 aaKnown RBP8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 TESK1Q15569 626 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 GABRA6Q16445 453 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 C3AR1Q16581 482 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 LPAL2Q16609 132 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 TBC1D28Q2M2D7 210 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 WDR86Q86TI4 376 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 STX12Q86Y82 276 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 C17orf78Q8N4C9 275 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 CLDND2Q8NHS1 167 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 MUCL1Q96DR8 90 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 GPHA2Q96T91 129 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 TOLLIPQ9H0E2 274 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 SEBOXQ9HB31 216 aaPredicted RBP8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 MBNL3Q9NUK0 354 aaKnown RBP8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 OR1A1Q9P1Q5 309 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 POLDIP2Q9Y2S7 368 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 LIPGQ9Y5X9 500 aa8.15□□□□□ -1.1
IGHV3-54-201ENST00000622166 DNAH14Q0VDD8 3507 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 TRGV5A0A0B4J1U4 118 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 A0A1W2PPE2 198 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 PCP4L1A6NKN8 68 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 IQCF6A8MYZ5 107 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 FAM90A26D6RGX4 464 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 H3BQ15 152 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 SH2D1BO14796 132 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 SYNGR2O43760 224 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 OR2C1O95371 312 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 OR2H2O95918 312 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 IFNA17P01571 189 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 IGKV1-5P01602 117 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 SP9P0CG40 484 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 SMIM6P0DI80 62 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 RAC2P15153 192 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 ZNF14P17017 642 aaPredicted RBP8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 B2MP61769 119 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 PPP1CBP62140 327 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 RUNX1Q01196 453 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 PMS2P11Q13670 270 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 ZNF146Q15072 292 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 MSMO1Q15800 293 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 ZNF585BQ52M93 769 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 KRBOX4Q5JUW0 171 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 PLA2G2CQ5R387 149 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 HEPN1Q6WQI6 88 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 Q6ZRM9 215 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 THNSL2Q86YJ6 484 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 FAM24BQ8N5W8 94 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 ZNF525Q8N782 197 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 SCCPDHQ8NBX0 429 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 ZBTB34Q8NCN2 500 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 ISOC2Q96AB3 205 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 RAB39BQ96DA2 213 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 TVP23CQ96ET8 276 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 TCEAL7Q9BRU2 100 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 C20orf24Q9BUV8 137 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 SIRT7Q9NRC8 400 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 LIN7CQ9NUP9 197 aaKnown RBP8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 SPRR3Q9UBC9 169 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 IL17BQ9UHF5 180 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 RNF150Q9ULK6 438 aa8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 PUS1Q9Y606 427 aaKnown RBP eCLIP8.14□□□□□ -1.11
IGHV3-54-201ENST00000622166 SZT2Q5T011 3432 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms