RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 COQ2Q96H96 371 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 RSRC1Q96IZ7 334 aaKnown RBP1.7□□□□□ -2.14
CPNE3-211ENST00000621526 TEAD3Q99594 435 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 CGREF1Q99674 301 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 SULT4A1Q9BR01 284 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 IFT27Q9BW83 186 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 PBOV1Q9GZY1 135 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 OR52D1Q9H346 318 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 RAB9BQ9NP90 201 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 EXOSC4Q9NPD3 245 aaKnown RBP1.7□□□□□ -2.14
CPNE3-211ENST00000621526 SPAG4Q9NPE6 437 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 BRD7Q9NPI1 651 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 GPR84Q9NQS5 396 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 FAM118AQ9NWS6 357 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 GFOD1Q9NXC2 390 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 IL20Q9NYY1 176 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 RCC2Q9P258 522 aaKnown RBP1.7□□□□□ -2.14
CPNE3-211ENST00000621526 DHDHQ9UQ10 334 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 MYRFQ9Y2G1 1151 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 GMPPBQ9Y5P6 360 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 DMRT1Q9Y5R6 373 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 CDH10Q9Y6N8 788 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 V9GYS6 101 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 FAT4Q6V0I7 4981 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 FSIP2Q5CZC0 6907 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 MUC2Q02817 5179 aa1.7□□□□□ -2.14
CPNE3-211ENST00000621526 IGKV1-27A0A075B6S5 117 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 TRBV9A0A0B4J1U6 114 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 A0A1B0GTI1 187 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 A0A1W2PPE3 182 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FAM230AA0A1W2PPH8 454 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 A0A1W2PPQ1 181 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FAM223BA6NKX1 122 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SMIM23A6NLE4 172 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF705EA8MWA4 302 aaPredicted RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 A8MWP6 167 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 C15orf65H3BRN8 121 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 BMPR1BO00238 502 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SIRPB1O00241 398 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SLC33A1O00400 549 aaPredicted RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 EREGO14944 169 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SLC22A1O15245 554 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 DEFB4AO15263 64 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 MRPS14O60783 128 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 GATBO75879 557 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 KDM4BO94953 1096 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 OR2C1O95371 312 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FADS2O95864 444 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 TRBV12-3P01733 135 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 H1F0P07305 194 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 LYNP07948 512 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 T-ENOLP0DO92 83 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 KITP10721 976 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 PSKH1P11801 424 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 MYOD1P15172 320 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF20P17024 532 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SPI1P17947 270 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 RPL35AP18077 110 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ALOX5APP20292 161 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 TNFRSF1BP20333 461 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FUT3P21217 361 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 PSMB6P28072 239 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FCGR2BP31994 310 aaPredicted RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 IFNGR2P38484 337 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 YAP1P46937 504 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 OR3A3P47888 321 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 LGALS7P47929 136 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 RBP2P50120 134 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 GNG10P50151 68 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 CRISP1P54107 249 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SMIM11AP58511 58 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 PSMA6P60900 246 aaKnown RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ACTR3P61158 418 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 STX1BP61266 288 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 NDPQ00604 133 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ROM1Q03395 351 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ATP5G2Q06055 141 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 PDZK1IP1Q13113 114 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 CYLC2Q14093 348 aaPredicted RBP1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FXYD3Q14802 87 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 OXA1LQ15070 435 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 UBE2V2Q15819 145 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 CYBRD1Q53TN4 286 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 CT45A1Q5HYN5 189 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SLC35F1Q5T1Q4 408 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 GLT8D1Q68CQ7 371 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 EPGNQ6UW88 154 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF66Q6ZN08 573 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 CYP4Z1Q86W10 505 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 FAM223AQ8IWN6 122 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 IFT20Q8IY31 132 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SAXO1Q8IYX7 474 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ELMOD2Q8IZ81 293 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 SLC37A3Q8NCC5 494 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF439Q8NDP4 499 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 MNS1Q8NEH6 495 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 OR5T1Q8NG75 326 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 OR51L1Q8NGJ5 315 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 OR14K1Q8NGZ2 314 aa1.69□□□□□ -2.14
CPNE3-211ENST00000621526 ZNRF2Q8NHG8 242 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms