RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 NXPH2O95156 264 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 MMP9P14780 707 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 MRPS15P82914 257 aaKnown RBP13.23□□□□□ -0.29
CD40-207ENST00000620709 ATAD3CQ5T2N8 411 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 Q6YL49 198 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 FAM216BQ8N7L0 139 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 OCSTAMPQ9BR26 566 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 CHIAQ9BZP6 476 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 SIRPDQ9H106 197 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 SPACA1Q9HBV2 294 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 COPZ2Q9P299 210 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 NLKQ9UBE8 527 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 ANAPC10Q9UM13 185 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 TRRAPQ9Y4A5 3859 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 IGHV1-69DA0A0B4J2H0 117 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 NDUFB3O43676 98 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 IGHV1-69P01742 117 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 MUC1P15941 1255 aaPredicted RBP13.23□□□□□ -0.29
CD40-207ENST00000620709 PLA1AQ53H76 456 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 STEAP1BQ6NZ63 245 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 SLC36A1Q7Z2H8 476 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 OR4C16Q8NGL9 310 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 H1FXQ92522 213 aaKnown RBP13.23□□□□□ -0.29
CD40-207ENST00000620709 SULT4A1Q9BR01 284 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 HES4Q9HCC6 221 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 ZNF581Q9P0T4 197 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 RCC2Q9P258 522 aaKnown RBP13.23□□□□□ -0.29
CD40-207ENST00000620709 IL36RNQ9UBH0 155 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 RPUSD1Q9UJJ7 312 aaKnown RBP13.23□□□□□ -0.29
CD40-207ENST00000620709 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 ZNF736B4DX44 427 aaPredicted RBP13.22□□□□□ -0.29
CD40-207ENST00000620709 KNG1P01042 644 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 CD74P04233 296 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 CD3DP04234 171 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 FCER2P06734 321 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 RAG2P55895 527 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 PRB3Q04118 309 aaPredicted RBP13.22□□□□□ -0.29
CD40-207ENST00000620709 SPIN3Q5JUX0 258 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 PRR31Q5SQ13 230 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 VMO1Q7Z5L0 202 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 GVQW1Q8N7I0 195 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 OR10Z1Q8NGY1 313 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 CMSS1Q9BQ75 279 aaKnown RBP13.22□□□□□ -0.29
CD40-207ENST00000620709 FAAP24Q9BTP7 215 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 MMP28Q9H239 520 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 IFT22Q9H7X7 185 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 MCUBQ9NWR8 336 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 KAAG1Q9UBP8 84 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 AK3Q9UIJ7 227 aa13.22□□□□□ -0.29
CD40-207ENST00000620709 A0A0U1RQK1 487 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 A0A1W2PRD5 423 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 A0A1W2PRF3 423 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 A0A1W2PRM7 423 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 WIPF1O43516 503 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 RAB3DO95716 219 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 TFF1P04155 84 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 NAT1P18440 290 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 TBPP20226 339 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 SRSF4Q08170 494 aaKnown RBP13.21□□□□□ -0.29
CD40-207ENST00000620709 C17orf107Q6ZR85 190 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 OR4F5Q8NH21 305 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 CREB3L1Q96BA8 519 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 WDR13Q9H1Z4 485 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 PRDM13Q9H4Q3 707 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 BEX1Q9HBH7 125 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 SIRT7Q9NRC8 400 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 FAM96BQ9Y3D0 163 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 NUBP2Q9Y5Y2 271 aa13.21□□□□□ -0.29
CD40-207ENST00000620709 NKX6-3A6NJ46 265 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.2□□□□□ -0.3
CD40-207ENST00000620709 GLAP06280 429 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 SELLP14151 372 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 GLRA1P23415 457 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 DTYMKP23919 212 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 HLA-DMAP28067 261 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 DUSP1P28562 367 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 CCR6P51684 374 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 MEF2DQ14814 521 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 ZNF146Q15072 292 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 SMIM21Q3B7S5 101 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 ACTBL2Q562R1 376 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 LRRC10Q5BKY1 277 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 RNASE10Q5GAN6 216 aaKnown RBP13.2□□□□□ -0.3
CD40-207ENST00000620709 FAAP20Q6NZ36 180 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 ZNF782Q6ZMW2 699 aaPredicted RBP13.2□□□□□ -0.3
CD40-207ENST00000620709 HOGA1Q86XE5 327 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 OR4S1Q8NGB4 309 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 SSMEM1Q8WWF3 244 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 CYYR1Q96J86 154 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 CHST6Q9GZX3 395 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 GLS2Q9UI32 602 aa13.2□□□□□ -0.3
CD40-207ENST00000620709 UBE2QL1A1L167 161 aa13.19□□□□□ -0.3
CD40-207ENST00000620709 MCRIP1C9JLW8 97 aa13.19□□□□□ -0.3
CD40-207ENST00000620709 IGHV4-59P01825 116 aa13.19□□□□□ -0.3
CD40-207ENST00000620709 TCRBP04435 133 aa13.19□□□□□ -0.3
CD40-207ENST00000620709 ZNF44P15621 663 aa13.19□□□□□ -0.3
CD40-207ENST00000620709 GABRA2P47869 451 aa13.19□□□□□ -0.3
CD40-207ENST00000620709 RSBN1Q5VWQ0 802 aaPredicted RBP13.19□□□□□ -0.3
CD40-207ENST00000620709 OR52W1Q6IF63 320 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms