RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 FCGR2CP31995 323 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 CLEC2AQ6UVW9 174 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 UNQ6126/PRO20091Q6UXV3 157 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 SLC38A6Q8IZM9 456 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 OR10C1Q96KK4 312 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 SYT3Q9BQG1 590 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 MRPL37Q9BZE1 423 aaKnown RBP18.09■□□□□ 0.49
SGMS1-210ENST00000619438 BCL2L14Q9BZR8 327 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 RAB1BQ9H0U4 201 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 RIMS4Q9H426 269 aaPredicted RBP18.09■□□□□ 0.49
SGMS1-210ENST00000619438 IFT22Q9H7X7 185 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 DNAJB11Q9UBS4 358 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 KCNIP3Q9Y2W7 256 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 F8VVB4 439 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 F8VWA3 439 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 H0YIZ8 118 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 RLN2P04090 185 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 RBM39Q14498 530 aaKnown RBP18.09■□□□□ 0.49
SGMS1-210ENST00000619438 ATXN7L3Q14CW9 347 aaPredicted RBP18.09■□□□□ 0.49
SGMS1-210ENST00000619438 PDCD1Q15116 288 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 LRTM2Q8N967 370 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 ARPC5LQ9BPX5 153 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 REG4Q9BYZ8 158 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 OR51I2Q9H344 312 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 NAA60Q9H7X0 242 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 Q9N2K0 584 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 RASL12Q9NYN1 266 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 PRR13Q9NZ81 148 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 TRBV6-6A0A0A6YYG2 114 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 POM121CA8CG34 1229 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 SHOXO15266 292 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 SYNGR1O43759 233 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 LILRA1O75019 489 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 PIGPP57054 158 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 FAM76BQ5HYJ3 339 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 OR2T2Q6IF00 324 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 HAGHLQ6PII5 290 aaPredicted RBP18.08■□□□□ 0.48
SGMS1-210ENST00000619438 PDZD9Q8IXQ8 264 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 STOML3Q8TAV4 291 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 DCUN1D4Q92564 292 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 RSRP1Q9BUV0 290 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 SUCNR1Q9BXA5 334 aa18.08■□□□□ 0.48
SGMS1-210ENST00000619438 MFSD2BA6NFX1 497 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 MPTX1A8MV57 137 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 J3QT63 122 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 LY6HO94772 140 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 RAC2P15153 192 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 PPOXP50336 477 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 DSCR9P59020 149 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 PPP1CBP62140 327 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 ZCCHC24Q8N2G6 241 aaKnown RBP18.07■□□□□ 0.48
SGMS1-210ENST00000619438 BHLHE23Q8NDY6 225 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 OR1J1Q8NGS3 322 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 RBPMSQ93062 196 aaKnown RBP18.07■□□□□ 0.48
SGMS1-210ENST00000619438 AQP10Q96PS8 301 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 RTL8AQ9BWD3 113 aa18.07■□□□□ 0.48
SGMS1-210ENST00000619438 GSX1Q9H4S2 264 aaPredicted RBP18.07■□□□□ 0.48
SGMS1-210ENST00000619438 RNF223E7ERA6 249 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 TMEM187Q14656 261 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 ABCA11PQ4W5N1 156 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 LRP11Q86VZ4 500 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 ZNF525Q8N782 197 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 RTN4IP1Q8WWV3 396 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-210ENST00000619438 TOMM40LQ969M1 308 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 SMR3AQ99954 134 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 MICU1Q9BPX6 476 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 MS4A5Q9H3V2 200 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 KIR2DS1A0A191URI9 304 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 A0A1B0GW55 424 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 IFNA21P01568 189 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 HOXB5P09067 269 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 CTXN2P0C2S0 81 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 DUX4L2P0CJ85 424 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 DUX4L3P0CJ86 424 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 DUX4L4P0CJ87 422 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 DUX4L5P0CJ88 424 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 DUX4L6P0CJ89 424 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 DUX4L7P0CJ90 424 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 SELEP16581 610 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 TUBG1P23258 451 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 CA6P23280 308 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 KIR2DS4P43632 304 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 LUMP51884 338 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-210ENST00000619438 HERV-K104P61576 105 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 KIR2DS1Q14954 304 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 MSMPQ1L6U9 139 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 CCDC28AQ8IWP9 274 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 FAM185AQ8N0U4 392 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 CCDC71LQ8N9Z2 235 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 OR1S1Q8NH92 325 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 FAM168AQ92567 244 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 ZNF471Q9BX82 626 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-210ENST00000619438 TUBG2Q9NRH3 451 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 DUX4Q9UBX2 424 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 PFDN2Q9UHV9 154 aa18.06■□□□□ 0.48
SGMS1-210ENST00000619438 LRP5LA4QPB2 252 aa18.05■□□□□ 0.48
SGMS1-210ENST00000619438 I3L521 148 aa18.05■□□□□ 0.48
SGMS1-210ENST00000619438 PRKACAP17612 351 aa18.05■□□□□ 0.48
SGMS1-210ENST00000619438 NUP62P37198 522 aaPredicted RBP18.05■□□□□ 0.48
SGMS1-210ENST00000619438 ERVS71-1P61550 626 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms