RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CDK5R1Q15078 307 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 GLYATQ6IB77 296 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 MOB3BQ86TA1 216 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 OR51L1Q8NGJ5 315 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 OR13A1Q8NGR1 328 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 CNN2Q99439 309 aaKnown RBP3.44□□□□□ -1.86
SNCA-213ENST00000618500 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 CHST6Q9GZX3 395 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 HRH4Q9H3N8 390 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 SRD5A3Q9H8P0 318 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 CLN6Q9NWW5 311 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 ETAA1Q9NY74 926 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 ANKRD34BA5PLL1 514 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 ZNF785A8K8V0 405 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 TNFRSF11BO00300 401 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 SNX3O60493 162 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 GMNNO75496 209 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 GYPBP06028 91 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 BMI1P35226 326 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 MNAT1P51948 309 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 APOC4P55056 127 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 F2RL1P55085 397 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 DIAPH2-AS1Q14236 149 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 ANKRD55Q3KP44 614 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 RDH10Q8IZV5 341 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 TPRX1Q8N7U7 411 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 RNF183Q96D59 192 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 ARMC1Q9NVT9 282 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 N6AMT1Q9Y5N5 214 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 KIAA2026Q5HYC2 2103 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 LOC102724200A0A096LPH7 203 aaPredicted RBP3.43□□□□□ -1.86
SNCA-213ENST00000618500 IGKV1-12A0A0C4DH73 117 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 TMEM30CPA0ZSE6 113 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 A8MWP6 167 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 PRR32B1ATL7 298 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 C11orf94C9JXX5 98 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 ZNF670-ZNF695F2Z2N8 137 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 SIRPB1O00241 398 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 DEGS1O15121 323 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 SOX15O60248 233 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 CA11O75493 328 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 SC5DO75845 299 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 IGKV1D-12P01611 117 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 CSTBP04080 98 aaKnown RBP3.43□□□□□ -1.86
SNCA-213ENST00000618500 CAPGP40121 348 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 KIR2DS2P43631 304 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 NPBWR2P48146 333 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 CD81P60033 236 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 MPV17LQ2QL34 196 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 UTF1Q5T230 341 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 ZNF529Q6P280 563 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 LYG2Q86SG7 212 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 AQP11Q8NBQ7 271 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 CNIH3Q8TBE1 160 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 GHSRQ92847 366 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 RCN3Q96D15 328 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 ELAC2Q9BQ52 826 aaKnown RBP3.43□□□□□ -1.86
SNCA-213ENST00000618500 TMED9Q9BVK6 235 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 JAM3Q9BX67 310 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 EFCAB1Q9HAE3 211 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 SPAG4Q9NPE6 437 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 MBNL3Q9NUK0 354 aaKnown RBP3.43□□□□□ -1.86
SNCA-213ENST00000618500 IL36RNQ9UBH0 155 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 SLC23A1Q9UHI7 598 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 APLNQ9ULZ1 77 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 MYRFQ9Y2G1 1151 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 TRAV24A0A0B4J272 114 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 IGKV1-9A0A0C4DH69 117 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 C13orf42A0A1B0GVH6 325 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 FAM230AA0A1W2PPH8 454 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 CXorf65A6NEN9 183 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 OR5H14A6NHG9 310 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 FAM223BA6NKX1 122 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 SULT1B1O43704 296 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 CCR9P51686 369 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 EFNB1P98172 346 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 RBM39Q14498 530 aaKnown RBP3.43□□□□□ -1.86
SNCA-213ENST00000618500 C6orf183Q5T699 404 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 ZNF497Q6ZNH5 498 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 FAM223AQ8IWN6 122 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 SVOPQ8N4V2 548 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 OR9Q2Q8NGE9 314 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 OR52J3Q8NH60 311 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 OPALINQ96PE5 141 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 TEX12Q9BXU0 123 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 PARD6BQ9BYG5 372 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 TINAGL1Q9GZM7 467 aaPredicted RBP3.43□□□□□ -1.86
SNCA-213ENST00000618500 ALX4Q9H161 411 aaPredicted RBP3.43□□□□□ -1.86
SNCA-213ENST00000618500 INTS9Q9NV88 658 aaKnown RBP3.43□□□□□ -1.86
SNCA-213ENST00000618500 LRRC42Q9Y546 428 aa3.43□□□□□ -1.86
SNCA-213ENST00000618500 FAM90A7PA6NKC0 464 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 FAM90A23PA8MXZ1 464 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 SDCBPO00560 298 aaPredicted RBP3.42□□□□□ -1.86
SNCA-213ENST00000618500 RRHO14718 337 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 SPRY2O43597 315 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 COX4I1P13073 169 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 GALP22466 123 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 CD40LGP29965 261 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 HTD2P86397 168 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 TMEM244Q5VVB8 128 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms