RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CHATP28329 748 aa12.84□□□□□ -0.35
BRCA1-228ENST00000618469 BRS3P32247 399 aa12.84□□□□□ -0.35
BRCA1-228ENST00000618469 KRTAP10-3P60369 221 aa12.84□□□□□ -0.35
BRCA1-228ENST00000618469 C6orf183Q5T699 404 aa12.84□□□□□ -0.35
BRCA1-228ENST00000618469 SPARTQ8N0X7 666 aa12.84□□□□□ -0.35
BRCA1-228ENST00000618469 PRR18Q8N4B5 295 aa12.84□□□□□ -0.35
BRCA1-228ENST00000618469 OR2T6Q8NHC8 308 aa12.84□□□□□ -0.35
BRCA1-228ENST00000618469 NEDD4LQ96PU5 975 aa12.84□□□□□ -0.35
BRCA1-228ENST00000618469 CITED1Q99966 193 aa12.84□□□□□ -0.35
BRCA1-228ENST00000618469 TMEM14DPA8MWL7 114 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 CCRL2O00421 344 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 ORC5O43913 435 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 CA11O75493 328 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 GLAP06280 429 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 ARSBP15848 533 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 MYL9P24844 172 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 MNDAP41218 407 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 CLDN12P56749 244 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 MADCAM1Q13477 382 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 UBE2UQ5VVX9 321 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 GAPTQ8N292 157 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 OR10X1Q8NGY0 326 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 FCGR1BQ92637 280 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 SULT4A1Q9BR01 284 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 TM2D1Q9BX74 207 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 ZNF702PQ9H963 129 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 GFOD1Q9NXC2 390 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 FBLN5Q9UBX5 448 aa12.83□□□□□ -0.36
BRCA1-228ENST00000618469 OOSP1A8MZH6 123 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 LY6LH3BQJ8 138 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 SPINT2O43291 252 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 CD37P11049 281 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 RCC1P18754 421 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-228ENST00000618469 KIR2DS4P43632 304 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 EFNB2P52799 333 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 QRFPP83859 136 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 HABP2Q14520 560 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-228ENST00000618469 FBLN7Q53RD9 439 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 HES5Q5TA89 166 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 FAM53AQ6NSI3 398 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-228ENST00000618469 TRAT1Q6PIZ9 186 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 ZNF773Q6PK81 442 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 SLC16A12Q6ZSM3 486 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 OR2W3Q7Z3T1 314 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 C6orf201Q7Z4U5 140 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 OR52M1Q8NGK5 317 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 OR1L1Q8NH94 360 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 MRPL30Q8TCC3 161 aaKnown RBP12.82□□□□□ -0.36
BRCA1-228ENST00000618469 YTHDF1Q9BYJ9 559 aaKnown RBP12.82□□□□□ -0.36
BRCA1-228ENST00000618469 RAB9BQ9NP90 201 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 GNG12Q9UBI6 72 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 V9GY05 133 aa12.82□□□□□ -0.36
BRCA1-228ENST00000618469 A0A0A6YYD4 124 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 HBZP02008 142 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 BLVRBP30043 206 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-228ENST00000618469 LOXL3P58215 753 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 DIAPH2-AS1Q14236 149 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 ARSJQ5FYB0 599 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-228ENST00000618469 CD200R1LQ6Q8B3 271 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 KLHDC1Q8N7A1 406 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 OR51D1Q8NGF3 324 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 OR10V1Q8NGI7 309 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 OR56B4Q8NH76 319 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 CAPSLQ8WWF8 208 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 URM1Q9BTM9 101 aaKnown RBP12.81□□□□□ -0.36
BRCA1-228ENST00000618469 LPAR5Q9H1C0 372 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 LRRC42Q9Y546 428 aa12.81□□□□□ -0.36
BRCA1-228ENST00000618469 TRDV1A0A1B0GX56 115 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 A0A1W2PPI3 338 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 SHISA3A0PJX4 238 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 PDCD5O14737 125 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 HSD17B6O14756 317 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 TIMM23O14925 209 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 VSIG10L2P0DP72 767 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 OR10A3P58181 314 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 TMEM30BQ3MIR4 351 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 C22orf42Q6IC83 251 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 C11orf88Q6PI97 169 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 C16orf82Q7Z2V1 217 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 FAM3DQ96BQ1 224 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 AKR1E2Q96JD6 320 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 SLC25A33Q9BSK2 321 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 FAAP24Q9BTP7 215 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 PRSS22Q9GZN4 317 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 TAF9BQ9HBM6 251 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 CHMP1AQ9HD42 196 aaPredicted RBP12.8□□□□□ -0.36
BRCA1-228ENST00000618469 MBNL3Q9NUK0 354 aaKnown RBP12.8□□□□□ -0.36
BRCA1-228ENST00000618469 KCNIP1Q9NZI2 227 aa12.8□□□□□ -0.36
BRCA1-228ENST00000618469 TRAV1-2A0A0B4J238 106 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 SLC31A2O15432 143 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 REG1BP48304 166 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 RAB7AP51149 207 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 PSMD7P51665 324 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 TMEM95Q3KNT9 176 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 KCTD21Q4G0X4 260 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 DRAM1Q8N682 238 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 DTX3Q8N9I9 347 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 LIN7BQ9HAP6 207 aa12.79□□□□□ -0.36
BRCA1-228ENST00000618469 PLEKHJ1Q9NW61 149 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms