RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 PCDHB10Q9UN67 800 aa12.53□□□□□ -0.4
CBWD1-225ENST00000616944 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.53□□□□□ -0.4
CBWD1-225ENST00000616944 IGHV4-30-2A0A087WSY4 118 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 TRBV23-1A0A0A0MS06 115 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 FAM240BA0A1B0GVZ2 78 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 hADV38S2A0JD32 116 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 HBZP02008 142 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 DSCR9P59020 149 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 LMO4P61968 165 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 ZNF273Q14593 569 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 C17orf58Q2M2W7 97 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 DHRS11Q6UWP2 260 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 ZNF782Q6ZMW2 699 aaPredicted RBP12.52□□□□□ -0.4
CBWD1-225ENST00000616944 MINDY2Q8NBR6 621 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 OR13C8Q8NGS7 320 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 OR1L1Q8NH94 360 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 CLDND2Q8NHS1 167 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 C8orf46Q8TAG6 207 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 ENKURQ8TC29 256 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 PRRT1Q99946 306 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 KCNIP1Q9NZI2 227 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 LPAR3Q9UBY5 353 aa12.52□□□□□ -0.4
CBWD1-225ENST00000616944 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.4
CBWD1-225ENST00000616944 NOTCH2Q04721 2471 aa12.52□□□□□ -0.41
CBWD1-225ENST00000616944 TRGV10A0A0A0MS01 117 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 DISC1C4P0D8 188 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 CTXN2P0C2S0 81 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 C11orf91Q3C1V1 193 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 AADACL3Q5VUY0 350 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 TMEM200BQ69YZ2 307 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 IDO2Q6ZQW0 420 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 CENPSQ8N2Z9 138 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 UBALD1Q8TB05 177 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 H1FXQ92522 213 aaKnown RBP12.51□□□□□ -0.41
CBWD1-225ENST00000616944 ARL11Q969Q4 196 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 DPAGT1Q9H3H5 408 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 CALYQ9NYX4 217 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 COPZ2Q9P299 210 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 CR1P17927 2039 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 KBTBD11-OT1A0A1B0GTJ5 212 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 ZNF729A6NN14 1252 aaPredicted RBP12.51□□□□□ -0.41
CBWD1-225ENST00000616944 KIAA1324LA8MWY0 1029 aaPredicted RBP12.51□□□□□ -0.41
CBWD1-225ENST00000616944 A8MXK9 166 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 F2RL2O00254 374 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 TUSC2O75896 110 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 NDUFB6O95139 128 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 IFNA6P05013 189 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 HEXAP06865 529 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 DLX6P56179 175 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 RBMS2Q15434 407 aaKnown RBP12.51□□□□□ -0.41
CBWD1-225ENST00000616944 TRIM16LQ309B1 348 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 CCBE1Q6UXH8 406 aaPredicted RBP12.51□□□□□ -0.41
CBWD1-225ENST00000616944 BTN2A1Q7KYR7 527 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 PRR18Q8N4B5 295 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 GIMAP1Q8WWP7 306 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 UPRTQ96BW1 309 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 SSBP3Q9BWW4 388 aaPredicted RBP12.51□□□□□ -0.41
CBWD1-225ENST00000616944 TOLLIPQ9H0E2 274 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 TAS2R3Q9NYW6 316 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 RPUSD1Q9UJJ7 312 aaKnown RBP12.51□□□□□ -0.41
CBWD1-225ENST00000616944 SCP2D1Q9UJQ7 156 aa12.51□□□□□ -0.41
CBWD1-225ENST00000616944 C22orf46C9J442 243 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 BET1O15155 118 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 TCRBP04435 133 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 TSPAN5P62079 268 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 GNB2P62879 340 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 HTD2P86397 168 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 CLEC12BQ2HXU8 276 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 KRTAP1-3Q8IUG1 177 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 H1FOOQ8IZA3 346 aaPredicted RBP12.5□□□□□ -0.41
CBWD1-225ENST00000616944 LY6G5BQ8NDX9 201 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 TERB2Q8NHR7 220 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 IL1F10Q8WWZ1 152 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 DACT3Q96B18 629 aaPredicted RBP12.5□□□□□ -0.41
CBWD1-225ENST00000616944 GALMQ96C23 342 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 OR1A1Q9P1Q5 309 aa12.5□□□□□ -0.41
CBWD1-225ENST00000616944 A0A096LNT2 108 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 IGHV4-61A0A0C4DH41 118 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 OR5H14A6NHG9 310 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 PHF1O43189 567 aaPredicted RBP12.49□□□□□ -0.41
CBWD1-225ENST00000616944 SPINT2O43291 252 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 NFYAP23511 347 aaPredicted RBP12.49□□□□□ -0.41
CBWD1-225ENST00000616944 IL2RGP31785 369 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 FCGR2CP31995 323 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 LOXL3P58215 753 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 SCGB2B2Q4G0G5 96 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 ESCO2Q56NI9 601 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 TMEM17Q86X19 198 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 C11orf42Q8N5U0 333 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 OR6F1Q8NGZ6 308 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 OR10J5Q8NHC4 309 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 RFESDQ8TAC1 157 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 SLC25A21Q9BQT8 299 aaPredicted RBP12.49□□□□□ -0.41
CBWD1-225ENST00000616944 ZNF2Q9BSG1 426 aaPredicted RBP12.49□□□□□ -0.41
CBWD1-225ENST00000616944 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 TMPRSS13Q9BYE2 586 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 MMP28Q9H239 520 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 NUDT15Q9NV35 164 aa12.49□□□□□ -0.41
CBWD1-225ENST00000616944 SLC23A1Q9UHI7 598 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms