RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 HBE1P02100 147 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 BCL2P10415 239 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 GZMHP20718 246 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 CD82P27701 267 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 HOXA6P31267 233 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 PLPPR5Q32ZL2 321 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 TDRG1Q3Y452 100 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 TMEM183AQ8IXX5 376 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 SELENOHQ8IZQ5 122 aaKnown RBP11.33□□□□□ -0.6
MSH6-214ENST00000616033 SPTSSAQ969W0 71 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 OXGR1Q96P68 337 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 HS3ST6Q96QI5 342 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 Q9N2K0 584 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 SLC39A9Q9NUM3 307 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 PPP1R3CQ9UQK1 317 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 ICE1Q9Y2F5 2266 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 A0A1B0GU03 582 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 A0A1W2PNV4 684 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 LRRC3CA6NJW4 275 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 FOXI3A8MTJ6 420 aaPredicted RBP11.33□□□□□ -0.6
MSH6-214ENST00000616033 TCN2P20062 427 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 SSPNQ14714 243 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 SHBQ15464 509 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 RSPO1Q2MKA7 263 aaPredicted RBP11.33□□□□□ -0.6
MSH6-214ENST00000616033 SPINK9Q5DT21 86 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 SAPCD1Q5SSQ6 148 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 OR13D1Q8NGV5 346 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 HLA-CQ95604 372 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 SPIN2AQ99865 258 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 SPIN2BQ9BPZ2 258 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 TMEM204Q9BSN7 226 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 KCNS2Q9ULS6 477 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 CPAMD8Q8IZJ3 1885 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 RBMXL2O75526 392 aaKnown RBP11.32□□□□□ -0.6
MSH6-214ENST00000616033 UBE2G2P60604 165 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 LBHQ53QV2 105 aaPredicted RBP11.32□□□□□ -0.6
MSH6-214ENST00000616033 KIAA0895LQ68EN5 471 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 TM2D1Q9BX74 207 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 A0A087WWC5 75 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 MAP1LC3B2A6NCE7 125 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 ZNF737O75373 536 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 LMO1P25800 156 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 Q6ZPA2 131 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 ZNF488Q96MN9 340 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 TBX15Q96SF7 602 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 MAP1LC3BQ9GZQ8 125 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 AKIRIN1Q9H9L7 192 aaPredicted RBP11.32□□□□□ -0.6
MSH6-214ENST00000616033 LPAR2Q9HBW0 351 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 PARD6AQ9NPB6 346 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 PRSS50Q9UI38 385 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 GRIFINA4D1Z8 144 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 CRYAAP02489 173 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 TAS2R30P59541 319 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 ENDOGQ14249 297 aaKnown RBP11.32□□□□□ -0.6
MSH6-214ENST00000616033 RABEPKQ7Z6M1 372 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 ZDHHC23Q8IYP9 409 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 ATP5SQ99766 215 aa11.32□□□□□ -0.6
MSH6-214ENST00000616033 RP1L1Q8IWN7 2480 aaPredicted RBP11.32□□□□□ -0.6
MSH6-214ENST00000616033 A0A1B0GX78 115 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 C20orf202A1L168 122 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 PGPEP1LA6NFU8 196 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 DHHO43323 396 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 ZNF611Q8N823 705 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 NOL4LQ96MY1 436 aaPredicted RBP11.31□□□□□ -0.6
MSH6-214ENST00000616033 SDF2L1Q9HCN8 221 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 CACNG5Q9UF02 275 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 BCAT2O15382 392 aaPredicted RBP11.31□□□□□ -0.6
MSH6-214ENST00000616033 PSG2P11465 335 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 BSXQ3C1V8 233 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 RCC1LQ96I51 464 aaKnown RBP11.31□□□□□ -0.6
MSH6-214ENST00000616033 DEFB126Q9BYW3 111 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 PATZ1Q9HBE1 687 aaKnown RBP11.31□□□□□ -0.6
MSH6-214ENST00000616033 FSCN3Q9NQT6 498 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 MYOTQ9UBF9 498 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 TNFSF11O14788 317 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 GDF9O60383 454 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 MAS1LP35410 378 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 SLC16A14Q7RTX9 510 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 ODF3L1Q8IXM7 274 aa11.31□□□□□ -0.6
MSH6-214ENST00000616033 MUC3AQ02505 3323 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 PDCD6O75340 191 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 TIAF1O95411 115 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 OPN1MWP04001 364 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 ARL16Q0P5N6 197 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 ZNF726P1Q15940 193 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 FAM78BQ5VT40 261 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 TMEM256Q8N2U0 113 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 WDR1O75083 606 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 ZNF32P17041 273 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 GALNSP34059 522 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 TGFBR3Q03167 851 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 ZNF92Q03936 586 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 CNN3Q15417 329 aaKnown RBP11.3□□□□□ -0.6
MSH6-214ENST00000616033 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 C16orf54Q6UWD8 224 aa11.3□□□□□ -0.6
MSH6-214ENST00000616033 SNIP1Q8TAD8 396 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms