RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 FAM90A12PA8MX19 464 aa4□□□□□ -1.77
CHD9-221ENST00000615216 FAM90A5PA8MXJ8 464 aa4□□□□□ -1.77
CHD9-221ENST00000615216 FAM90A23PA8MXZ1 464 aa4□□□□□ -1.77
CHD9-221ENST00000615216 H3BMH7 237 aa4□□□□□ -1.77
CHD9-221ENST00000615216 FAM90A15PP0C7V4 464 aa4□□□□□ -1.77
CHD9-221ENST00000615216 FAM90A13PP0C7W8 464 aa4□□□□□ -1.77
CHD9-221ENST00000615216 FAM90A14PP0C7W9 464 aa4□□□□□ -1.77
CHD9-221ENST00000615216 FAM90A24PP0C7X0 464 aa4□□□□□ -1.77
CHD9-221ENST00000615216 COX7A1P24310 79 aa4□□□□□ -1.77
CHD9-221ENST00000615216 NPY1RP25929 384 aa4□□□□□ -1.77
CHD9-221ENST00000615216 PSG5Q15238 335 aa4□□□□□ -1.77
CHD9-221ENST00000615216 FAM209AQ5JX71 171 aa4□□□□□ -1.77
CHD9-221ENST00000615216 C9orf50Q5SZB4 431 aa4□□□□□ -1.77
CHD9-221ENST00000615216 DPF1Q92782 380 aa4□□□□□ -1.77
CHD9-221ENST00000615216 GHITMQ9H3K2 345 aa4□□□□□ -1.77
CHD9-221ENST00000615216 FRMPD3Q5JV73 1810 aa4□□□□□ -1.77
CHD9-221ENST00000615216 ARHGEF17Q96PE2 2063 aaPredicted RBP4□□□□□ -1.77
CHD9-221ENST00000615216 A0A087X0M5 115 aa4□□□□□ -1.77
CHD9-221ENST00000615216 A0A1B0GX30 115 aa4□□□□□ -1.77
CHD9-221ENST00000615216 MMP16P51512 607 aa4□□□□□ -1.77
CHD9-221ENST00000615216 ERVS71-1P61550 626 aa4□□□□□ -1.77
CHD9-221ENST00000615216 OR4P4Q8NGL7 312 aa4□□□□□ -1.77
CHD9-221ENST00000615216 TMEM208Q9BTX3 173 aa4□□□□□ -1.77
CHD9-221ENST00000615216 MIXL1Q9H2W2 232 aa4□□□□□ -1.77
CHD9-221ENST00000615216 HEXA-AS1Q9H8Q6 139 aa4□□□□□ -1.77
CHD9-221ENST00000615216 AP5S1Q9NUS5 200 aa4□□□□□ -1.77
CHD9-221ENST00000615216 NTMQ9P121 344 aa4□□□□□ -1.77
CHD9-221ENST00000615216 RAB29O14966 203 aa4□□□□□ -1.77
CHD9-221ENST00000615216 WISP3O95389 354 aaPredicted RBP4□□□□□ -1.77
CHD9-221ENST00000615216 PSMB2P49721 201 aa4□□□□□ -1.77
CHD9-221ENST00000615216 PSG6Q00889 435 aa4□□□□□ -1.77
CHD9-221ENST00000615216 C19orf57Q0VDD7 668 aa4□□□□□ -1.77
CHD9-221ENST00000615216 ADAD2Q8NCV1 583 aaKnown RBP4□□□□□ -1.77
CHD9-221ENST00000615216 OR4D10Q8NGI6 311 aa4□□□□□ -1.77
CHD9-221ENST00000615216 MYOZ3Q8TDC0 251 aa4□□□□□ -1.77
CHD9-221ENST00000615216 EID2BQ96D98 161 aa4□□□□□ -1.77
CHD9-221ENST00000615216 A0A1W2PPV9 198 aa4□□□□□ -1.77
CHD9-221ENST00000615216 K7N7A8 449 aa4□□□□□ -1.77
CHD9-221ENST00000615216 CORTO00230 105 aa4□□□□□ -1.77
CHD9-221ENST00000615216 SOCS1O15524 211 aa4□□□□□ -1.77
CHD9-221ENST00000615216 PLPPR5Q32ZL2 321 aa4□□□□□ -1.77
CHD9-221ENST00000615216 TGIF2LXQ8IUE1 241 aa4□□□□□ -1.77
CHD9-221ENST00000615216 TUSC5Q8IXB3 177 aa4□□□□□ -1.77
CHD9-221ENST00000615216 GCSAMQ8N6F7 178 aa4□□□□□ -1.77
CHD9-221ENST00000615216 ZNF645Q8N7E2 425 aa4□□□□□ -1.77
CHD9-221ENST00000615216 LRRC3BQ96PB8 259 aa4□□□□□ -1.77
CHD9-221ENST00000615216 GPX7Q96SL4 187 aaPredicted RBP4□□□□□ -1.77
CHD9-221ENST00000615216 ZFP30Q9Y2G7 519 aa4□□□□□ -1.77
CHD9-221ENST00000615216 WASHC3Q9Y3C0 194 aa4□□□□□ -1.77
CHD9-221ENST00000615216 NKX2-6A6NCS4 301 aa4□□□□□ -1.77
CHD9-221ENST00000615216 DHRS7CA6NNS2 312 aa4□□□□□ -1.77
CHD9-221ENST00000615216 HPRT1P00492 218 aa4□□□□□ -1.77
CHD9-221ENST00000615216 ISG15P05161 165 aa4□□□□□ -1.77
CHD9-221ENST00000615216 CELA2BP08218 269 aaPredicted RBP4□□□□□ -1.77
CHD9-221ENST00000615216 COL8A1P27658 744 aa4□□□□□ -1.77
CHD9-221ENST00000615216 KIR3DL2P43630 455 aa4□□□□□ -1.77
CHD9-221ENST00000615216 GZMMP51124 257 aa4□□□□□ -1.77
CHD9-221ENST00000615216 HOXA4Q00056 320 aaPredicted RBP4□□□□□ -1.77
CHD9-221ENST00000615216 TMEM255AQ5JRV8 349 aa4□□□□□ -1.77
CHD9-221ENST00000615216 FBXW9Q5XUX1 488 aa4□□□□□ -1.77
CHD9-221ENST00000615216 CBLN3Q6UW01 205 aa4□□□□□ -1.77
CHD9-221ENST00000615216 C16orf82Q7Z2V1 217 aa4□□□□□ -1.77
CHD9-221ENST00000615216 MOGAT3Q86VF5 341 aa4□□□□□ -1.77
CHD9-221ENST00000615216 PTPMT1Q8WUK0 201 aaPredicted RBP4□□□□□ -1.77
CHD9-221ENST00000615216 P2RX4Q99571 388 aa4□□□□□ -1.77
CHD9-221ENST00000615216 TNFSF18Q9UNG2 199 aa4□□□□□ -1.77
CHD9-221ENST00000615216 TMEM238LA0A1B0GVL6 79 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 A0A1W2PR80 420 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 A6NJY4 79 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 H3BQ15 152 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 BCL2P10415 239 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 BPIFA4PQ86YQ2 179 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 TGIF2LYQ8IUE0 185 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 C9orf40Q8IXQ3 194 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 OR4D11Q8NGI4 311 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 ABHD14AQ9BUJ0 271 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 CRISPLD2Q9H0B8 497 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 YBX2Q9Y2T7 364 aaKnown RBP3.99□□□□□ -1.77
CHD9-221ENST00000615216 PTPRDP23468 1912 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 ESPL1Q14674 2120 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 PLXNA3P51805 1871 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 RP1L1Q8IWN7 2480 aaPredicted RBP3.99□□□□□ -1.77
CHD9-221ENST00000615216 A0A1B0GTH9 108 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 PAFAH1B2P68402 229 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 RTP5Q14D33 572 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 PDCD1Q15116 288 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 RND1Q92730 232 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 SNX22Q96L94 193 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 HARBI1Q96MB7 349 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 TRAF4Q9BUZ4 470 aaPredicted RBP3.99□□□□□ -1.77
CHD9-221ENST00000615216 KLK13Q9UKR3 277 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 DOCK6Q96HP0 2047 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 KLF7O75840 302 aaPredicted RBP3.99□□□□□ -1.77
CHD9-221ENST00000615216 CCL2P13500 99 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 MAGEA5P43359 124 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 PIGYQ3MUY2 71 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 SAXO1Q8IYX7 474 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 RFESDQ8TAC1 157 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 FBLIM1Q8WUP2 373 aa3.99□□□□□ -1.77
CHD9-221ENST00000615216 IL22RA2Q969J5 263 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms