RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 BTNL8Q6UX41 500 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 TMEM56Q96MV1 263 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 USB1Q9BQ65 265 aaKnown RBP16.16■□□□□ 0.18
MMP28-204ENST00000615136 RIMS4Q9H426 269 aaPredicted RBP16.16■□□□□ 0.18
MMP28-204ENST00000615136 RHOFQ9HBH0 211 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 UQCC1Q9NVA1 299 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 POMT1Q9Y6A1 747 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 TMEM56-RWDD3S4R434 201 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 TRAV39A0A0B4J263 110 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 M0R1B8 84 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 WNT9BO14905 357 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 TIMM8AO60220 97 aaPredicted RBP16.16■□□□□ 0.18
MMP28-204ENST00000615136 FBXO24O75426 580 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 CTXN2P0C2S0 81 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 BMP5P22003 454 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 CEBPDP49716 269 aaPredicted RBP16.16■□□□□ 0.18
MMP28-204ENST00000615136 MEX3BQ6ZN04 569 aaKnown RBP16.16■□□□□ 0.18
MMP28-204ENST00000615136 TBC1D26Q86UD7 250 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 LRP11Q86VZ4 500 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 SPAG16Q8N0X2 631 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 DMBX1Q8NFW5 382 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 SEC11CQ9BY50 192 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 BCL2L14Q9BZR8 327 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 IGF2RP11717 2491 aa16.16■□□□□ 0.18
MMP28-204ENST00000615136 F8W036 122 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 DEGS1O15121 323 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 OR2H2O95918 312 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 TFF1P04155 84 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 FAM87AP0C7U9 286 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 KITLGP21583 273 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 ZNF818PQ6ZRF7 136 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 LYPD6BQ8NI32 183 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 PLPPR1Q8TBJ4 325 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 BSCL2Q96G97 398 aaPredicted RBP16.15■□□□□ 0.18
MMP28-204ENST00000615136 TREM1Q9NP99 234 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 SH3BGRL2Q9UJC5 107 aa16.15■□□□□ 0.18
MMP28-204ENST00000615136 RCL1Q9Y2P8 373 aaKnown RBP16.15■□□□□ 0.18
MMP28-204ENST00000615136 MUC1P15941 1255 aaPredicted RBP16.14■□□□□ 0.17
MMP28-204ENST00000615136 F2RL1P55085 397 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 TIMM23BQ5SRD1 257 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 ZNF565Q8N9K5 539 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 CLRN3Q8NCR9 226 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 SECTM1Q8WVN6 248 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 SFXN3Q9BWM7 321 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 C11orf1Q9H5F2 150 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 TMEM231Q9H6L2 316 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 IFT22Q9H7X7 185 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 POLDIP2Q9Y2S7 368 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 SPTBN4Q9H254 2564 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 IGKV1D-13A0A0B4J2D9 117 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 A0A0G2JNJ9 132 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 SLC33A1O00400 549 aaPredicted RBP16.14■□□□□ 0.17
MMP28-204ENST00000615136 TOR1AO14656 332 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 NXPH2O95156 264 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 IGKV1-13P0DP09 117 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 EIF2S3LQ2VIR3 472 aaKnown RBP16.14■□□□□ 0.17
MMP28-204ENST00000615136 ZNF718Q3SXZ3 478 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 ZNF880Q6PDB4 577 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 Q6ZRG5 221 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 FAM169BQ8N8A8 192 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 SNRNP40Q96DI7 357 aaKnown RBP16.14■□□□□ 0.17
MMP28-204ENST00000615136 GINS3Q9BRX5 216 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 TLNRD1Q9H1K6 362 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 WFDC1Q9HC57 220 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 UFSP2Q9NUQ7 469 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 Q9UFV3 132 aa16.14■□□□□ 0.17
MMP28-204ENST00000615136 ZZEF1O43149 2961 aa16.13■□□□□ 0.17
MMP28-204ENST00000615136 BORCS7-ASMTA0A0B4J1R7 106 aa16.13■□□□□ 0.17
MMP28-204ENST00000615136 DUXBA0A1W2PPF3 345 aa16.13■□□□□ 0.17
MMP28-204ENST00000615136 A8MXE2 369 aa16.13■□□□□ 0.17
MMP28-204ENST00000615136 SEC11BP0C7V7 166 aa16.13■□□□□ 0.17
MMP28-204ENST00000615136 MBNL2Q5VZF2 373 aaKnown RBP16.13■□□□□ 0.17
MMP28-204ENST00000615136 GAPTQ8N292 157 aa16.13■□□□□ 0.17
MMP28-204ENST00000615136 GPHA2Q96T91 129 aa16.13■□□□□ 0.17
MMP28-204ENST00000615136 SPIN2AQ99865 258 aa16.13■□□□□ 0.17
MMP28-204ENST00000615136 SPIN2BQ9BPZ2 258 aa16.13■□□□□ 0.17
MMP28-204ENST00000615136 CHD3Q12873 2000 aaKnown RBP16.13■□□□□ 0.17
MMP28-204ENST00000615136 NKX2-6A6NCS4 301 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 TMEM210A6NLX4 147 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 GCH1P30793 250 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 SPIN3Q5JUX0 258 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 PCSK4Q6UW60 755 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 CLEC9AQ6UXN8 241 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 ABHD14BQ96IU4 210 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 FAM212BQ9NTI7 297 aaPredicted RBP16.12■□□□□ 0.17
MMP28-204ENST00000615136 UBE2J1Q9Y385 318 aaPredicted RBP16.12■□□□□ 0.17
MMP28-204ENST00000615136 FAM96BQ9Y3D0 163 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 NBEAQ8NFP9 2946 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 SMG1Q96Q15 3661 aaKnown RBP16.12■□□□□ 0.17
MMP28-204ENST00000615136 TLN1Q9Y490 2541 aaKnown RBP16.12■□□□□ 0.17
MMP28-204ENST00000615136 CLEC18AA5D8T8 446 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 CD5P06127 495 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 SPP1P10451 314 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 UCP1P25874 307 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 CCKARP32238 428 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 SELENOHQ8IZQ5 122 aaKnown RBP16.12■□□□□ 0.17
MMP28-204ENST00000615136 CLEC18CQ8NCF0 446 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 CXXC4Q9H2H0 198 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 HES4Q9HCC6 221 aa16.12■□□□□ 0.17
MMP28-204ENST00000615136 OR14J1Q9UGF5 321 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms