RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 OR4F5Q8NH21 305 aa13.47□□□□□ -0.25
CBWD3-211ENST00000615061 LINC01006Q8NI28 216 aa13.47□□□□□ -0.25
CBWD3-211ENST00000615061 MMP28Q9H239 520 aa13.47□□□□□ -0.25
CBWD3-211ENST00000615061 ABCB10Q9NRK6 738 aa13.47□□□□□ -0.25
CBWD3-211ENST00000615061 IFITM5A6NNB3 132 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 PDCD5O14737 125 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 LDLRAD4O15165 306 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 ORC5O43913 435 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 FGF9P31371 208 aaPredicted RBP13.46□□□□□ -0.25
CBWD3-211ENST00000615061 PSMD7P51665 324 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 PRRX1P54821 245 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 LOXL3P58215 753 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 SRSF4Q08170 494 aaKnown RBP13.46□□□□□ -0.25
CBWD3-211ENST00000615061 DIAPH2-AS1Q14236 149 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 FBLN7Q53RD9 439 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 Q6ZPA2 131 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 OR1L1Q8NH94 360 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 CHCHD6Q9BRQ6 235 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 BEX1Q9HBH7 125 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 TCF19Q9Y242 345 aa13.46□□□□□ -0.25
CBWD3-211ENST00000615061 FOXI3A8MTJ6 420 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-211ENST00000615061 LEUTXA8MZ59 168 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 LY6LH3BQJ8 138 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 SDCBPO00560 298 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-211ENST00000615061 CA11O75493 328 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 SLC2A2P11168 524 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-211ENST00000615061 GADD45AP24522 165 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 VEGFCP49767 419 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 EFNB2P52799 333 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 TMEM50BP56557 158 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 TPTE2P1Q5T6R2 138 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 FAM89BQ8N5H3 189 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 TSPAN14Q8NG11 270 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 OR10A7Q8NGE5 316 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 URM1Q9BTM9 101 aaKnown RBP13.45□□□□□ -0.26
CBWD3-211ENST00000615061 ZNF747Q9BV97 191 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 SSR3Q9UNL2 185 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 MMP24Q9Y5R2 645 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 CLPSL1A2RUU4 121 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 F2RL2O00254 374 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 TNFAIP8O95379 198 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 HBZP02008 142 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 CD36P16671 472 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 HDHD3Q9BSH5 251 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-211ENST00000615061 LIN7BQ9HAP6 207 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 TAF9BQ9HBM6 251 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 MBNL3Q9NUK0 354 aaKnown RBP13.45□□□□□ -0.26
CBWD3-211ENST00000615061 PLEKHJ1Q9NW61 149 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 GFOD1Q9NXC2 390 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 FBLN5Q9UBX5 448 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 SIGLEC9Q9Y336 463 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 CMYA5Q8N3K9 4069 aa13.45□□□□□ -0.26
CBWD3-211ENST00000615061 LOC100506127A0A0U1RQW1 187 aa13.44□□□□□ -0.26
CBWD3-211ENST00000615061 A6NDX4 124 aa13.44□□□□□ -0.26
CBWD3-211ENST00000615061 H3BUI4 141 aa13.44□□□□□ -0.26
CBWD3-211ENST00000615061 DYNLT3P51808 116 aa13.44□□□□□ -0.26
CBWD3-211ENST00000615061 C6orf183Q5T699 404 aa13.44□□□□□ -0.26
CBWD3-211ENST00000615061 OLFML2AQ68BL7 652 aa13.44□□□□□ -0.26
CBWD3-211ENST00000615061 OR10V1Q8NGI7 309 aa13.44□□□□□ -0.26
CBWD3-211ENST00000615061 ARHGAP5-AS1Q96IT6 56 aa13.44□□□□□ -0.26
CBWD3-211ENST00000615061 SLC31A2O15432 143 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 SPINT2O43291 252 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 TSPAN9O75954 239 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 KRTAP10-3P60369 221 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 MOGAT2Q3SYC2 334 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 PLAC9Q5JTB6 97 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 OR52M1Q8NGK5 317 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 CENPOQ9BU64 300 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 AK3Q9UIJ7 227 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 RNF114Q9Y508 228 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 A0A087WXM4 84 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 POM121CA8CG34 1229 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 NAPSAO96009 420 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 CLEC2LP0C7M8 214 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 SDC2P34741 201 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 CEACAM3P40198 252 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 MXD1Q05195 221 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 OR10X1Q8NGY0 326 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 WFDC12Q8WWY7 111 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 RPEQ96AT9 228 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 CREB3L1Q96BA8 519 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 ZNF696Q9H7X3 374 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 GNG12Q9UBI6 72 aa13.43□□□□□ -0.26
CBWD3-211ENST00000615061 A0A1B0GUS0 222 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 TGFBR1P36897 503 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 ZNF134P52741 427 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 PROK1P58294 105 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 MADCAM1Q13477 382 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 GNMTQ14749 295 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 SLC16A12Q6ZSM3 486 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 Q6ZTK2 550 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 OR52L2PQ8NGH6 319 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 TOMM40LQ969M1 308 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 KCTD7Q96MP8 289 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 PECRQ9BY49 303 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 C16orf95Q9H693 158 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 CHMP1AQ9HD42 196 aaPredicted RBP13.42□□□□□ -0.26
CBWD3-211ENST00000615061 RAB22AQ9UL26 194 aa13.42□□□□□ -0.26
CBWD3-211ENST00000615061 AMMECR1Q9Y4X0 333 aaPredicted RBP13.42□□□□□ -0.26
CBWD3-211ENST00000615061 NOTOA8MTQ0 251 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms