RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 NAT1P18440 290 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 FPR2P25090 351 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 ERVFRD-1P60508 538 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 ZNF846Q147U1 533 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 C11orf42Q8N5U0 333 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 C7orf69Q9H7B7 122 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 TAS2R8Q9NYW2 309 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 ANAPC10Q9UM13 185 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 AUP1Q9Y679 476 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 CR1P17927 2039 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 F2RL2O00254 374 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 CD5LO43866 347 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 SCTP09683 121 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 GSTT2P0CG29 244 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 GSTT2BP0CG30 244 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 IGHV1-8P0DP01 117 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 OMGP23515 440 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 PRTN3P24158 256 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 PPP5CP53041 499 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 ARPC4P59998 168 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 HTD2P86397 168 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 CHRFAM7AQ494W8 412 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 Q8N7P7 452 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 OR52M1Q8NGK5 317 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 OR1L1Q8NH94 360 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 IL1F10Q8WWZ1 152 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 KIRREL1Q96J84 757 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 SIRPDQ9H106 197 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 ZNF107Q9UII5 783 aaPredicted RBP12.06□□□□□ -0.48
CD48-203ENST00000613788 ITPR3Q14573 2671 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 OTOGQ6ZRI0 2925 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 MED13LQ71F56 2210 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 IGKV1D-8A0A087WSZ0 117 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 SDCBPO00560 298 aaPredicted RBP12.06□□□□□ -0.48
CD48-203ENST00000613788 DIRAS3O95661 229 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 FCER2P06734 321 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 CD40LGP29965 261 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 OR3A3P47888 321 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 TAS2R46P59540 309 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 PRAMEF5Q5TYX0 476 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 STEAP3Q658P3 488 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 OR5AP2Q8NGF4 316 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 UBALD1Q8TB05 177 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 SNAPC3Q92966 411 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 TSC22D3Q99576 134 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 PCGF1Q9BSM1 259 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 HEXA-AS1Q9H8Q6 139 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 UNKLQ9H9P5 680 aaKnown RBP12.06□□□□□ -0.48
CD48-203ENST00000613788 OR2S2Q9NQN1 319 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 KCNS2Q9ULS6 477 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 RBMX2Q9Y388 322 aaKnown RBP12.06□□□□□ -0.48
CD48-203ENST00000613788 SESN1Q9Y6P5 492 aa12.06□□□□□ -0.48
CD48-203ENST00000613788 ZNF736B4DX44 427 aaPredicted RBP12.05□□□□□ -0.48
CD48-203ENST00000613788 HSPA12AO43301 675 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 MMP23AO75900 390 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 CSF1P09603 554 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 MMP9P14780 707 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 ZBTB25P24278 435 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 NFYBP25208 207 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 GDNFP39905 211 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 TAS2R19P59542 299 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 LTC4SQ16873 150 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 NCR3LG1Q68D85 454 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 C5orf24Q7Z6I8 188 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 LYSMD2Q8IV50 215 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 TMEM229BQ8NBD8 167 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 OR10J5Q8NHC4 309 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 CCDC32Q9BV29 185 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 TMPRSS13Q9BYE2 586 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 TMEM133Q9H2Q1 129 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 NECAP2Q9NVZ3 263 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 GNG12Q9UBI6 72 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 JPT1Q9UK76 154 aa12.05□□□□□ -0.48
CD48-203ENST00000613788 YLPM1P49750 1951 aaKnown RBP12.05□□□□□ -0.48
CD48-203ENST00000613788 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 BET1O15155 118 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 RGS11O94810 467 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 TBPP20226 339 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 HLA-DMAP28067 261 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 INPP1P49441 399 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 AP3S2P59780 193 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 CDK10Q15131 360 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 ACTBL2Q562R1 376 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 IGSF11Q5DX21 431 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 TRIQKQ629K1 86 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 ZNF782Q6ZMW2 699 aaPredicted RBP12.04□□□□□ -0.48
CD48-203ENST00000613788 OR13D1Q8NGV5 346 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 OR5H2Q8NGV7 314 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 SDHCQ99643 169 aaPredicted RBP12.04□□□□□ -0.48
CD48-203ENST00000613788 GINS4Q9BRT9 223 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 CABLES2Q9BTV7 478 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 SIRT7Q9NRC8 400 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 GFOD1Q9NXC2 390 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 SLC23A1Q9UHI7 598 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 CREBBPQ92793 2442 aa12.04□□□□□ -0.48
CD48-203ENST00000613788 KIAA2026Q5HYC2 2103 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 DSCAML1Q8TD84 2053 aa12.03□□□□□ -0.48
CD48-203ENST00000613788 A0A087X0M5 115 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms