RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CHCHD2Q9Y6H1 151 aaPredicted RBP18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 RAB11AP62491 216 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 VAMP2P63027 116 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 ARG2P78540 354 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 Q6ZSR3 168 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 ZNF100Q8IYN0 542 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 ZNF283Q8N7M2 679 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 CA5BP1Q8WTZ4 195 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 REEP6Q96HR9 211 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 MED29Q9NX70 200 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 ZNF319Q9P2F9 582 aa18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 MAP1BP46821 2468 aaKnown RBP18.84■□□□□ 0.61
POLR2J3-220ENST00000613744 DUXBA0A1W2PPF3 345 aa18.83■□□□□ 0.61
POLR2J3-220ENST00000613744 XKRY2A2RUG3 117 aa18.83■□□□□ 0.61
POLR2J3-220ENST00000613744 PGA3P0DJD8 388 aa18.83■□□□□ 0.61
POLR2J3-220ENST00000613744 OR1C1Q15619 314 aa18.83■□□□□ 0.61
POLR2J3-220ENST00000613744 OR5C1Q8NGR4 320 aa18.83■□□□□ 0.61
POLR2J3-220ENST00000613744 TMEM170AQ8WVE7 144 aa18.83■□□□□ 0.61
POLR2J3-220ENST00000613744 HIST1H2AAQ96QV6 131 aa18.83■□□□□ 0.61
POLR2J3-220ENST00000613744 TMEM210A6NLX4 147 aa18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 PHF1O43189 567 aaPredicted RBP18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 DLEU1O43261 78 aa18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 FAM87AP0C7U9 286 aa18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 BIDP55957 195 aa18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 IL24Q13007 206 aa18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 C1orf194Q5T5A4 169 aa18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 ABHD17AQ96GS6 310 aa18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 AGMATQ9BSE5 352 aa18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 PNRC2Q9NPJ4 139 aaKnown RBP18.83■□□□□ 0.6
POLR2J3-220ENST00000613744 KIR2DL5BA0A0G2JN68 375 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 KIR2DL5BA0A0G2JPC4 375 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 CLEC18AA5D8T8 446 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 NEURL1O76050 574 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 PFN1P07737 140 aaKnown RBP18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 ZNF25P17030 456 aaPredicted RBP18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 G0S2P27469 103 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 ASCL1P50553 236 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 FAM3BP58499 235 aaPredicted RBP18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 KIR2DL5AQ8N109 375 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 CLEC18CQ8NCF0 446 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 OR5L1Q8NGL2 311 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 ATP5SQ99766 215 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 ALKBH4Q9NXW9 302 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 RNF150Q9ULK6 438 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 VDAC3Q9Y277 283 aa18.82■□□□□ 0.6
POLR2J3-220ENST00000613744 PTGDSP41222 190 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 DYNLT3P51808 116 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 PAX5Q02548 391 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 PMS2P11Q13670 270 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 ACOT6Q3I5F7 207 aaPredicted RBP18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 PHLDA2Q53GA4 152 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 ANKRD39Q53RE8 183 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 FAM57BQ71RH2 274 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 CENPVQ7Z7K6 275 aaPredicted RBP18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 OR5D18Q8NGL1 313 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 MBD3L1Q8WWY6 194 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 ATG101Q9BSB4 218 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 GOLT1BQ9Y3E0 138 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 RFNGQ9Y644 331 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 SPENQ96T58 3664 aaKnown RBP18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 CACNA1GO43497 2377 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 A0A0G2JMM0 328 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 A0A0U1RQV5 110 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 A0A1W2PPB8 328 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 A0A1W2PRS3 328 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 KIR3DP1A8MWS1 328 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 MSTNO14793 375 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 FCGR2AP12318 317 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 C17orf67Q0P5P2 114 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 PRDX4Q13162 271 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 DDIT4LQ96D03 193 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 TMEM56Q96MV1 263 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 GLRX2Q9NS18 164 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 TMEM56-RWDD3S4R434 201 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 NBEAQ8NFP9 2946 aa18.81■□□□□ 0.6
POLR2J3-220ENST00000613744 SUMO3P55854 103 aaPredicted RBP18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 HDHD3Q9BSH5 251 aaPredicted RBP18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 PIEZO2Q9H5I5 2752 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 ZNF71Q9NQZ8 489 aaPredicted RBP18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 GNG13Q9P2W3 67 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 NKX2-6A6NCS4 301 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 ANKUB1A6NFN9 424 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 TSPO2Q5TGU0 170 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 ADPRHL1Q8NDY3 354 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 SGCZQ96LD1 299 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 TMEM222Q9H0R3 208 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 PRORYQ9H606 182 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 SH2D2AQ9NP31 389 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 NAT8Q9UHE5 227 aa18.8■□□□□ 0.6
POLR2J3-220ENST00000613744 DHRS3O75911 302 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 IFNA1P01562 189 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 IGHG1P01857 330 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 CLRN1P58418 232 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 FXYD4P59646 89 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 OR8B8Q15620 311 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 SLC25A47Q6Q0C1 308 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 OR2V1Q8NHB1 315 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 PGAM5Q96HS1 289 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 PROK2Q9HC23 129 aa18.79■□□□□ 0.6
POLR2J3-220ENST00000613744 SERINC1Q9NRX5 453 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms