RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ZNF414Q96IQ9 312 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 TRBV23-1A0A0A0MS06 115 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 ZNF716A6NP11 495 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 CER1O95813 267 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 C17orf47Q8NEP4 570 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 OR9G4Q8NGQ1 327 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 FLRT3Q9NZU0 649 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 MOB4Q9Y3A3 225 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 PLXNA1Q9UIW2 1896 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H1AQ02539 215 aaPredicted RBP7.75□□□□□ -1.17
TTC28-208ENST00000612946 RPS19BP1Q86WX3 136 aaKnown RBP7.75□□□□□ -1.17
TTC28-208ENST00000612946 LINC00615Q96LM1 132 aaPredicted RBP7.75□□□□□ -1.17
TTC28-208ENST00000612946 LTB4R2Q9NPC1 389 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 TRAV9-2A0A087WT02 112 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 ICOSLGO75144 302 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 DNAL4O96015 105 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 CA1P00915 261 aaPredicted RBP7.75□□□□□ -1.17
TTC28-208ENST00000612946 GDF1P27539 372 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 MRPL58Q14197 206 aaKnown RBP7.75□□□□□ -1.17
TTC28-208ENST00000612946 MS4A18H0YCH9 400 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 MPZL1O95297 269 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 P2RY2P41231 377 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 PRRX1P54821 245 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 PMVKQ15126 192 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 MS4A18Q3C1V0 323 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 DECR2Q9NUI1 292 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 A0A1B0GWB2 263 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 NDUFA2O43678 99 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 CYP2G1PQ6ZSU1 146 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 COA4Q9NYJ1 87 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 ESDP10768 282 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 ARSAP15289 507 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 TMEM52BQ4KMG9 183 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 ZNF880Q6PDB4 577 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 SMOC1Q9H4F8 434 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 HSF4Q9ULV5 492 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 SCN10AQ9Y5Y9 1956 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 A0A1W2PR48 441 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 MKRN2OSH3BPM6 223 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 FAM53BQ14153 422 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 CDCA3Q99618 268 aaPredicted RBP7.75□□□□□ -1.17
TTC28-208ENST00000612946 RBFOX2O43251 390 aaKnown RBP eCLIP7.75□□□□□ -1.17
TTC28-208ENST00000612946 DRD1P21728 446 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 GNG3P63215 75 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 Q5PR19 223 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 MSL2Q9HCI7 577 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 PLXNB1O43157 2135 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 IBA57Q5T440 356 aaKnown RBP7.75□□□□□ -1.17
TTC28-208ENST00000612946 TMEM222Q9H0R3 208 aa7.75□□□□□ -1.17
TTC28-208ENST00000612946 TRBV5-3A0A0A0MS03 114 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 PVRP15151 417 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 LDLRAD2Q5SZI1 272 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 TEPPQ6URK8 271 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 IP6K3Q96PC2 410 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 IGHV1-69-2A0A0G2JMI3 117 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 A0A1W2PRS3 328 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 CHST5Q9GZS9 411 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 MAP1LC3AQ9H492 121 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 OBP2AQ9NY56 170 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 COL24A1Q17RW2 1714 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 SLC35E4Q6ICL7 350 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM71F2Q6NXP2 309 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 BHLHE23Q8NDY6 225 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM234AQ9H0X4 552 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 H3BP45 60 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 TMEM50BP56557 158 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 UBE2V1Q13404 147 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 ANKRD34AQ69YU3 496 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 TNFSF13O75888 250 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 RRADP55042 308 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 RNFT1Q5M7Z0 435 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 PLPPR1Q8TBJ4 325 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 SGK494Q96LW2 274 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 C20orf141Q9NUB4 165 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 LINC01553A4QN01 128 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A10PA6NDY2 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A18PA6NE21 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A16PA6NEW6 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A20PA6NIJ5 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A8PA6NJQ4 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A7PA6NKC0 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A22PA8MWA6 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A12PA8MX19 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A5PA8MXJ8 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A23PA8MXZ1 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 PPYP01298 95 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A15PP0C7V4 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A13PP0C7W8 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A14PP0C7W9 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 FAM90A24PP0C7X0 464 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 DCAF10Q5QP82 559 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 TMEM170AQ8WVE7 144 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 MS4A6AQ9H2W1 248 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 PDFQ9HBH1 243 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 ADIPOQQ15848 244 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 NPEPL1Q8NDH3 523 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 SLC25A2Q9BXI2 301 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 TMEM106BQ9NUM4 274 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 VSIG10L2P0DP72 767 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 DYNLRB1Q9NP97 96 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms