RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 NFAM1Q8NET5 270 aaPredicted RBP9.39□□□□□ -0.91
FAM3A-221ENST00000612856 RAB39BQ96DA2 213 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 C4orf45Q96LM5 186 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 C1orf123Q9NWV4 160 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 GNG13Q9P2W3 67 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 U3KQA8 63 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 IGKV1D-42A0A075B6H8 117 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 DBX1A6NMT0 343 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 A6NNC1 897 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 H3BQ15 152 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 M0R143 59 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 ZIC3O60481 467 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 NEURL1O76050 574 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 PRB1P04280 392 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 RAB4BP61018 213 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 DLK1P80370 383 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 MRPS34P82930 218 aaKnown RBP9.39□□□□□ -0.91
FAM3A-221ENST00000612856 NHLH2Q02577 135 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 PRDX4Q13162 271 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 PMS2P11Q13670 270 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 DRAM2Q6UX65 266 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 SLC25A42Q86VD7 318 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 DMBX1Q8NFW5 382 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 C2orf50Q96LR7 162 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 OR5B12Q96R08 314 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 C2CD3Q4AC94 2353 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 IGKV1D-43A0A0B4J1Z2 117 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 A0A1W2PP11 408 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 H0YIZ8 118 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 LMX1BO60663 402 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 CD8AP01732 235 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 TRGC1P0CF51 173 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 ZBTB25P24278 435 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 KISS1Q15726 138 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 ZNF66Q6ZN08 573 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 SLC35G3Q8N808 338 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 LRRC29Q8WV35 223 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 OR10C1Q96KK4 312 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 SEBOXQ9HB31 216 aaPredicted RBP9.39□□□□□ -0.91
FAM3A-221ENST00000612856 MS4A18H0YCH9 400 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 KLF4O43474 513 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 ADAM20O43506 726 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 WT1P19544 449 aaPredicted RBP9.39□□□□□ -0.91
FAM3A-221ENST00000612856 RPS4Y1P22090 263 aaKnown RBP9.39□□□□□ -0.91
FAM3A-221ENST00000612856 GGTLC2Q14390 218 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 MS4A18Q3C1V0 323 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 C6orf201Q7Z4U5 140 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 DYRK2Q92630 601 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 PCNX3Q9H6A9 2034 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 ZNF816-ZNF321PA0A0X1KG74 233 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 AQP7O14520 342 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 SFTPCP11686 197 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 PTGER4P35408 488 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 PPP1CCP36873 323 aaKnown RBP9.38□□□□□ -0.91
FAM3A-221ENST00000612856 OR3A4PP47883 348 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 PSG4Q00888 419 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 KLRB1Q12918 225 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 C1orf185Q5T7R7 199 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 ASB13Q8WXK3 278 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 SOX7Q9BT81 388 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 CHST5Q9GZS9 411 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 ZNF286AQ9HBT8 521 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 HAO2Q9NYQ3 351 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 SOD3P08294 240 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 C22orf15Q8WYQ4 148 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 FAAP24Q9BTP7 215 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 ZNF703Q9H7S9 590 aaPredicted RBP9.38□□□□□ -0.91
FAM3A-221ENST00000612856 PATZ1Q9HBE1 687 aaKnown RBP9.38□□□□□ -0.91
FAM3A-221ENST00000612856 AK3Q9UIJ7 227 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 A0A1W2PPQ1 181 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 ERVS71-1P61550 626 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 GNB1P62873 340 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 TMEM211Q6ICI0 200 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 ONECUT1Q9UBC0 465 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 CLDN16Q9Y5I7 305 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 DMDP11532 3685 aa9.38□□□□□ -0.91
FAM3A-221ENST00000612856 FGF16O43320 207 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 LYPD3O95274 346 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 PTBP3O95758 552 aaKnown RBP9.37□□□□□ -0.91
FAM3A-221ENST00000612856 COX5BP10606 129 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 FOXF2Q12947 444 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 LCN15Q6UWW0 184 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 SPOCK3Q9BQ16 436 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 MAGT1Q9H0U3 335 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 SAP30LQ9HAJ7 183 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 TMEM38BQ9NVV0 291 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 WSB1Q9Y6I7 421 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 XKRY2A2RUG3 117 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 OR4C45A6NMZ5 311 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 J3QRE1 110 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 OPN1MWP04001 364 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 PGA3P0DJD8 388 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 OPN1MW2P0DN77 364 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 OPN1MW3P0DN78 364 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 TESK1Q15569 626 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 ZNF573Q86YE8 665 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 OR13G1Q8NGZ3 307 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 VPS25Q9BRG1 176 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 CISD1Q9NZ45 108 aaKnown RBP9.37□□□□□ -0.91
FAM3A-221ENST00000612856 B3GAT1Q9P2W7 334 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms