RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CGB3P0DN86 165 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 CGB7P0DN87 165 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 GDNFP39905 211 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 MAP2K4P45985 399 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 EFNB2P52799 333 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 RPS25P62851 125 aaKnown RBP9.92□□□□□ -0.82
CBWD3-208ENST00000612050 BAIAP2L2Q6UXY1 529 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 OR2W3Q7Z3T1 314 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 LRRTM1Q86UE6 522 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 KLHDC1Q8N7A1 406 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 TMEM104Q8NE00 496 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 OR4K15Q8NH41 348 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 PIFOQ8TCI5 191 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 PLEKHJ1Q9NW61 149 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 V9GY05 133 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 TRAV39A0A0B4J263 110 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 CCRL2O00421 344 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 SLC17A2O00624 439 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 SLC22A1O15245 554 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 OR2F2O95006 317 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 IGHV3-7P01780 117 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 CSF1P09603 554 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 VSIG8P0DPA2 414 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 BLVRBP30043 206 aaPredicted RBP9.91□□□□□ -0.82
CBWD3-208ENST00000612050 RPS27AP62979 156 aaKnown RBP9.91□□□□□ -0.82
CBWD3-208ENST00000612050 C8orf31Q8N9H6 132 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 LEAP2Q969E1 77 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 GALMQ96C23 342 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 MMP27Q9H306 513 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 RIMS4Q9H426 269 aaPredicted RBP9.91□□□□□ -0.82
CBWD3-208ENST00000612050 GFOD1Q9NXC2 390 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 MGAT4AQ9UM21 535 aa9.91□□□□□ -0.82
CBWD3-208ENST00000612050 AK6Q9Y3D8 172 aaKnown RBP9.91□□□□□ -0.82
CBWD3-208ENST00000612050 HSD17B6O14756 317 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 DENRO43583 198 aaKnown RBP9.9□□□□□ -0.82
CBWD3-208ENST00000612050 FBXO24O75426 580 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 HBZP02008 142 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 TMEM11P17152 192 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 GALP22466 123 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 PSMB9P28065 219 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 FABP5Q01469 135 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 SRSF4Q08170 494 aaKnown RBP9.9□□□□□ -0.82
CBWD3-208ENST00000612050 LDLRAD2Q5SZI1 272 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 MOB1BQ7L9L4 216 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 MOB3BQ86TA1 216 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 LYPD6Q86Y78 171 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 THNSL2Q86YJ6 484 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 SETD6Q8TBK2 473 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 RBM14Q96PK6 669 aaKnown RBP9.9□□□□□ -0.82
CBWD3-208ENST00000612050 OCSTAMPQ9BR26 566 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 TM2D1Q9BX74 207 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 TAF9BQ9HBM6 251 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 OR2S2Q9NQN1 319 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 NDUFB11Q9NX14 153 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 STEAP1Q9UHE8 339 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 MOB4Q9Y3A3 225 aa9.9□□□□□ -0.82
CBWD3-208ENST00000612050 TET2Q6N021 2002 aaPredicted RBP9.9□□□□□ -0.82
CBWD3-208ENST00000612050 IGHV3-43A0A0B4J1X8 118 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 C12orf77C9JDV5 145 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 C15orf65H3BRN8 121 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 IGHV3-43DP0DP04 118 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 GADD45AP24522 165 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 EMX1Q04741 257 aaPredicted RBP9.9□□□□□ -0.83
CBWD3-208ENST00000612050 P2RY14Q15391 338 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 C9orf152Q5JTZ5 239 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 OR10K2Q6IF99 312 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 CCBE1Q6UXH8 406 aaPredicted RBP9.9□□□□□ -0.83
CBWD3-208ENST00000612050 TMEM91Q6ZNR0 172 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 CENPVQ7Z7K6 275 aaPredicted RBP9.9□□□□□ -0.83
CBWD3-208ENST00000612050 Q8N2B8 174 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 LINC00311Q8N616 119 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 OR56B1Q8NGI3 324 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 OR56B4Q8NH76 319 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 ZNF702PQ9H963 129 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 VCX3AQ9NNX9 186 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 ZNF581Q9P0T4 197 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 JPT1Q9UK76 154 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 SIGLEC9Q9Y336 463 aa9.9□□□□□ -0.83
CBWD3-208ENST00000612050 RRP15Q9Y3B9 282 aaKnown RBP9.9□□□□□ -0.83
CBWD3-208ENST00000612050 TRAV1-2A0A0B4J238 106 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 TMEM14DPA8MWL7 114 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 LY6LH3BQJ8 138 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 SNRNP70P08621 437 aaKnown RBP9.89□□□□□ -0.83
CBWD3-208ENST00000612050 RAB3BP20337 219 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 CD24P25063 80 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 CHATP28329 748 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 ZNF816Q0VGE8 651 aaPredicted RBP9.89□□□□□ -0.83
CBWD3-208ENST00000612050 ABCA11PQ4W5N1 156 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 STEAP3Q658P3 488 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 TGIF2LXQ8IUE1 241 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 GAPTQ8N292 157 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 DRAM1Q8N682 238 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 UBALD1Q8TB05 177 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 FAAP24Q9BTP7 215 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 MBNL3Q9NUK0 354 aaKnown RBP9.89□□□□□ -0.83
CBWD3-208ENST00000612050 SSR3Q9UNL2 185 aa9.89□□□□□ -0.83
CBWD3-208ENST00000612050 ANK2Q01484 3957 aa9.88□□□□□ -0.83
CBWD3-208ENST00000612050 TRDV1A0A1B0GX56 115 aa9.88□□□□□ -0.83
CBWD3-208ENST00000612050 A0A1W2PPE3 182 aa9.88□□□□□ -0.83
CBWD3-208ENST00000612050 METTL21EPA6NDL7 271 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms