RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 COL4A4P53420 1690 aaPredicted RBP11.3□□□□□ -0.6
TCF3-220ENST00000611869 CA11O75493 328 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 CNIH1O95406 144 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 F12P00748 615 aaPredicted RBP11.3□□□□□ -0.6
TCF3-220ENST00000611869 ZNF708P17019 499 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 GNB1P62873 340 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 IL24Q13007 206 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 CBLN2Q8IUK8 224 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 FGFBP3Q8TAT2 258 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 PCNX2A6NKB5 2137 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 KIAA2026Q5HYC2 2103 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 BTBD17A6NE02 478 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 TMPRSS2O15393 492 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 NDUFB3O43676 98 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 NEURL1O76050 574 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 FLI1Q01543 452 aaPredicted RBP11.3□□□□□ -0.6
TCF3-220ENST00000611869 IGFBP7Q16270 282 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 CXorf66Q5JRM2 361 aaPredicted RBP11.3□□□□□ -0.6
TCF3-220ENST00000611869 RNF144BQ7Z419 303 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 BMPERQ8N8U9 685 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 SLC35E1Q96K37 410 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 COX5BP10606 129 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 G6PCP35575 357 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 TMEM45BQ96B21 275 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 LINC00470Q9BZP3 86 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 DIDO1Q9BTC0 2240 aaKnown RBP11.29□□□□□ -0.6
TCF3-220ENST00000611869 MPTX1A8MV57 137 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 MBP02144 154 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 HNF1AP20823 631 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 HIST2H3AQ71DI3 136 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 SLC35B3Q9H1N7 401 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 SLC25A22Q9H936 323 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 MMP24Q9Y5R2 645 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 CADP27708 2225 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 LHX2P50458 406 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 FOXG1P55316 489 aaPredicted RBP11.29□□□□□ -0.6
TCF3-220ENST00000611869 LGALS4P56470 323 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 KLF14Q8TD94 323 aaPredicted RBP11.29□□□□□ -0.6
TCF3-220ENST00000611869 TMEM222Q9H0R3 208 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 OR6C3Q9NZP0 311 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 OR7C2O60412 319 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 DEDDO75618 318 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 DEFA4P12838 97 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 ATP6V0CP27449 155 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 RUNX1Q01196 453 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 PDZD11Q5EBL8 140 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 LINC00596Q86U02 117 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 OR52L2PQ8NGH6 319 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 OR52M1Q8NGK5 317 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 TIMD4Q96H15 378 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 OSGIN2Q9Y236 505 aa11.29□□□□□ -0.6
TCF3-220ENST00000611869 OBSL1O75147 1896 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 MAP1LC3B2A6NCE7 125 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 TMEM210A6NLX4 147 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 NAT2P11245 290 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 CD59P13987 128 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 DAOP14920 347 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 CLDN18P56856 261 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 ERVS71-1P61550 626 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 COL10A1Q03692 680 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 IZUMO4Q1ZYL8 232 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 LRRC10Q5BKY1 277 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 ABLIM2Q6H8Q1 611 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 ETV3LQ6ZN32 361 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 ZNF429Q86V71 674 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 MAP1LC3BQ9GZQ8 125 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 LTBP2Q14767 1821 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 A0A1W2PPE3 182 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 SCGB2A1O75556 95 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 NAAAQ02083 359 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 Q0VFX4 171 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 EIF2S3LQ2VIR3 472 aaKnown RBP11.28□□□□□ -0.6
TCF3-220ENST00000611869 ADAMTS17Q8TE56 1095 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 IL36RNQ9UBH0 155 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 MSGN1A6NI15 193 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 AHRRA9YTQ3 701 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 CD8AP01732 235 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 GZMHP20718 246 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 CCL8P80075 99 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 ERHP84090 104 aaKnown RBP11.28□□□□□ -0.6
TCF3-220ENST00000611869 P2RY6Q15077 328 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 GABRA6Q16445 453 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 C4orf17Q53FE4 359 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 R3HDM4Q96D70 268 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 NPTNQ9Y639 398 aa11.28□□□□□ -0.6
TCF3-220ENST00000611869 A0A0A6YYD4 124 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 A0A1W2PPH5 198 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 RHBDL1O75783 438 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 MGST1P10620 155 aaKnown RBP11.27□□□□□ -0.6
TCF3-220ENST00000611869 TRAT1Q6PIZ9 186 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 TMEM252Q8N6L7 170 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 ABHD14BQ96IU4 210 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 CABLES2Q9BTV7 478 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 Q9N2K0 584 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A10PA6NDY2 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A18PA6NE21 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A16PA6NEW6 464 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms