RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MRPL33O75394 65 aaKnown RBP17.45■□□□□ 0.38
SSBP3-216ENST00000610401 KLF7O75840 302 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-216ENST00000610401 SLC34A2O95436 690 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 CDS2O95674 445 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 LRTM2Q8N967 370 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 GATAD1Q8WUU5 269 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 RNF138Q8WVD3 245 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 POM121Q96HA1 1249 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 LY6G6EA0A0G2JKS1 128 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 UBE2L5PA0A1B0GUS4 154 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 KIAA1324LA8MWY0 1029 aaPredicted RBP17.44■□□□□ 0.38
SSBP3-216ENST00000610401 RPL36A-HNRNPH2H7BZ11 118 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 RBMXL2O75526 392 aaKnown RBP17.44■□□□□ 0.38
SSBP3-216ENST00000610401 VDAC1P21796 283 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 PAX9P55771 341 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 UCP2P55851 309 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 PMP22Q01453 160 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 PSMF1Q92530 271 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 CABLES2Q9BTV7 478 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 U3KQA8 63 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 EPHA8P29322 1005 aaPredicted RBP17.44■□□□□ 0.38
SSBP3-216ENST00000610401 CXCL12P48061 93 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 CLN3Q13286 438 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 PHF7Q9BWX1 381 aaPredicted RBP17.44■□□□□ 0.38
SSBP3-216ENST00000610401 Q9N2K0 584 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 OR6C6A6NF89 314 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 CA11O75493 328 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 EGR1P18146 543 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 LINC00205P59089 165 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 TMEM211Q6ICI0 200 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 TMPRSS7Q7RTY8 843 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.44■□□□□ 0.38
SSBP3-216ENST00000610401 TUSC5Q8IXB3 177 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 SEMA5BQ9P283 1151 aa17.44■□□□□ 0.38
SSBP3-216ENST00000610401 A0A087WZY1 265 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 LOC102725191A0A1B0GVB3 256 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 ZNF716A6NP11 495 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 CST2P09228 141 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 COL19A1Q14993 1142 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 USF2Q15853 346 aaPredicted RBP17.43■□□□□ 0.38
SSBP3-216ENST00000610401 ZNF808Q8N4W9 903 aaPredicted RBP17.43■□□□□ 0.38
SSBP3-216ENST00000610401 SLC25A22Q9H936 323 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 CA6P23280 308 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 STARD6P59095 220 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 OR10J5Q8NHC4 309 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 ATP5SQ99766 215 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 RBKSQ9H477 322 aa17.43■□□□□ 0.38
SSBP3-216ENST00000610401 PRSS8Q16651 343 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 GGNQ86UU5 652 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 CXorf67Q86X51 503 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-216ENST00000610401 MKXQ8IYA7 352 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 PLPPR1Q8TBJ4 325 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 IMMP1LQ96LU5 166 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 HIST1H2AAQ96QV6 131 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 UNKLQ9H9P5 680 aaKnown RBP17.42■□□□□ 0.38
SSBP3-216ENST00000610401 GFOD1Q9NXC2 390 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 OR14J1Q9UGF5 321 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 CEBPDP49716 269 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-216ENST00000610401 ALKBH2Q6NS38 261 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 CARFQ8N187 725 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 PSENENQ9NZ42 101 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 NMSQ5H8A3 153 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 LYSMD4Q5XG99 296 aa17.42■□□□□ 0.38
SSBP3-216ENST00000610401 CD300LBA8K4G0 201 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 GLIPR1P48060 266 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 ZNF726P1Q15940 193 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 GNPNAT1Q96EK6 184 aaPredicted RBP17.41■□□□□ 0.38
SSBP3-216ENST00000610401 KRASP01116 189 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 FIP1L1Q6UN15 594 aaKnown RBP17.41■□□□□ 0.38
SSBP3-216ENST00000610401 AGBL5Q8NDL9 886 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 TMEM37Q8WXS4 190 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 C10orf35Q96D05 121 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 PACRGQ96M98 296 aaPredicted RBP17.41■□□□□ 0.38
SSBP3-216ENST00000610401 YPEL4Q96NS1 127 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 ELOVL1Q9BW60 279 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 MED13Q9UHV7 2174 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 LAMP3Q9UQV4 416 aa17.41■□□□□ 0.38
SSBP3-216ENST00000610401 TAS2R30P59541 319 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 ID3Q02535 119 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 LTC4SQ16873 150 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 CPT1CQ8TCG5 803 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 DNASE2BQ8WZ79 361 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 MRPS17Q9Y2R5 130 aaKnown RBP17.4■□□□□ 0.38
SSBP3-216ENST00000610401 NCKAP5O14513 1909 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 A0A1W2PPQ1 181 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 CLDN1O95832 211 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 COL8A2P25067 703 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 F2RP25116 425 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 OR2V1Q8NHB1 315 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 DMRT1Q9Y5R6 373 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 DMXL2Q8TDJ6 3036 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 OR5H1A6NKK0 313 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 IGHV3-13P01766 116 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 IGHV3-7P01780 117 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 HNF1AP20823 631 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 ZNF816Q0VGE8 651 aaPredicted RBP17.4■□□□□ 0.38
SSBP3-216ENST00000610401 EXT1Q16394 746 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 TMEM42Q69YG0 159 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 SSX9Q7RTT3 188 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 HIST3H2BBQ8N257 126 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms