RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 WASF3Q9UPY6 502 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 CDRT15L2A8MXV6 281 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 HSD17B6O14756 317 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 CEACAM1P13688 526 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 ERVFRD-1P60508 538 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 UBE2KP61086 200 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 GFI1BQ5VTD9 330 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 DPPA3Q6W0C5 159 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 SLC35E3Q7Z769 313 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 OR5D13Q8NGL4 314 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 R3HDM4Q96D70 268 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 RIMS4Q9H426 269 aaPredicted RBP12.56□□□□□ -0.4
CTCFL-219ENST00000608720 GLRX2Q9NS18 164 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 RFNGQ9Y644 331 aa12.56□□□□□ -0.4
CTCFL-219ENST00000608720 PIGBOS1A0A0B4J2F0 54 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 MRPL33O75394 65 aaKnown RBP12.55□□□□□ -0.4
CTCFL-219ENST00000608720 TRGC2P03986 189 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 SRP19P09132 144 aaKnown RBP12.55□□□□□ -0.4
CTCFL-219ENST00000608720 TRGC1P0CF51 173 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 CASP6P55212 293 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 TNFRSF9Q07011 255 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 USF2Q15853 346 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-219ENST00000608720 CEACAM21Q3KPI0 293 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 SP5Q6BEB4 398 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-219ENST00000608720 MKXQ8IYA7 352 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 ABHD5Q8WTS1 349 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 TVP23CQ96ET8 276 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 ZNF845Q96IR2 970 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-219ENST00000608720 LINC00470Q9BZP3 86 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 HIPK2Q9H2X6 1198 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 ATP23Q9Y6H3 246 aa12.55□□□□□ -0.4
CTCFL-219ENST00000608720 IGKV1D-13A0A0B4J2D9 117 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 CCDC163A0A0D9SF12 145 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 H0Y980 276 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 TRAPPC2LH3BP13 241 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 CHST1O43916 411 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 CST7O76096 145 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 HSPB1P04792 205 aaKnown RBP12.54□□□□□ -0.4
CTCFL-219ENST00000608720 CFIP05156 583 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 IGKV1-13P0DP09 117 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 GDF1P27539 372 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 S100GP29377 79 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 GPM6AP51674 278 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 Q0VFX4 171 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 IL24Q13007 206 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 HERPUD1Q15011 391 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 PPP1R32Q7Z5V6 425 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 ODF3L1Q8IXM7 274 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 ZDHHC23Q8IYP9 409 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 PLPPR1Q8TBJ4 325 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 RBMXL1Q96E39 390 aaKnown RBP12.54□□□□□ -0.4
CTCFL-219ENST00000608720 CCL28Q9NRJ3 127 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 ZDBF2Q9HCK1 2354 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 IGKV3D-15A0A087WSY6 115 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 PHOX2AO14813 284 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 CYB5BO43169 146 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 TMEM50AO95807 157 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 HBE1P02100 147 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 OTX2P32243 289 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 RND2P52198 227 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 NUBP1P53384 320 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 GFRA1P56159 465 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 DLK1P80370 383 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 ARF1P84077 181 aaKnown RBP12.54□□□□□ -0.4
CTCFL-219ENST00000608720 TLE4Q04727 773 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 ZNF506Q5JVG8 444 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 CDCP2Q5VXM1 449 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 MRPL21Q7Z2W9 205 aaKnown RBP12.54□□□□□ -0.4
CTCFL-219ENST00000608720 NEK7Q8TDX7 302 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 ATP5SQ99766 215 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 FGF23Q9GZV9 251 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-219ENST00000608720 DEPPQ9NTK1 212 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 SHANK1Q9Y566 2161 aa12.54□□□□□ -0.4
CTCFL-219ENST00000608720 ZNF727A8MUV8 499 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 PGLYRP1O75594 196 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-219ENST00000608720 GCGP01275 180 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 IGHV3-9P01782 118 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 CCNOP22674 350 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 HAGHQ16775 308 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 C5orf24Q7Z6I8 188 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 TMEM217Q8N7C4 229 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 FRZBQ92765 325 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 PLK3Q9H4B4 646 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 MTCH1Q9NZJ7 389 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 LIPGQ9Y5X9 500 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 TGIF2-C20orf24A0A0A6YYL0 155 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 DFFBO76075 338 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 SCAF4O95104 1147 aaKnown RBP12.53□□□□□ -0.4
CTCFL-219ENST00000608720 GZMBP10144 247 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 CYB561P49447 251 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 TAS2R30P59541 319 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 ICAM4Q14773 271 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 SLC10A1Q14973 349 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 ZNF343Q6P1L6 599 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 LINC00596Q86U02 117 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 TMEM183AQ8IXX5 376 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 C1orf87Q8N0U7 546 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 ZNF664Q8N3J9 261 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 OR5A2Q8NGI9 324 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms