RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	BCL2L14	Q9BZR8	327 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232		Q9N2K0	584 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	FAM221A	A4D161	298 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	NKX2-6	A6NCS4	301 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	HSPA12A	O43301	675 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	CXCL13	O43927	109 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	C1QL1	O75973	258 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	ZNF205	O95201	554 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	FBP1	P09467	338 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	HOXA5	P20719	270 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	UCP1	P25874	307 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	FGF12	P61328	243 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	RPS23	P62266	143 aa	Known RBP	13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	PLGLB1	Q02325	96 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	ID3	Q02535	119 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	MPV17L	Q2QL34	196 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	BRICD5	Q6PL45	260 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	YRDC	Q86U90	279 aa	Known RBP	13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	SELENOH	Q8IZQ5	122 aa	Known RBP	13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	HSD17B11	Q8NBQ5	300 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	OR10D3	Q8NH80	312 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	FGFBP3	Q8TAT2	258 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	REPIN1	Q9BWE0	567 aa	Known RBP	13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	SLC7A10	Q9NS82	523 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	COL6A6	A6NMZ7	2263 aa		13.16	□□□□□ -0.3
CELF4-223	ENST00000603232	IGKV3D-15	A0A087WSY6	115 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	KIR2DS1	A0A191URI9	304 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	KLRC4-KLRK1	H3BQV0	150 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	TXNL1	O43396	289 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	OR7C1	O76099	320 aa	Predicted RBP	13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	TK1	P04183	234 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	WNT2	P09544	360 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	COX5B	P10606	129 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	VDAC1	P21796	283 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	KIR2DS4	P43632	304 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	KIR2DS1	Q14954	304 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	NMS	Q5H8A3	153 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	ADAM5	Q6NVV9	412 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	DPPA3	Q6W0C5	159 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	TMEM252	Q8N6L7	170 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	BBC3	Q96PG8	261 aa	Predicted RBP	13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	KIAA1456	Q9P272	454 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	CFAP46	Q8IYW2	2715 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	IGSF23	A1L1A6	192 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	IFITM10	A6NMD0	228 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	GATC	O43716	136 aa	Known RBP	13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	PATE4	P0C8F1	98 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	ATP6V0C	P27449	155 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	PPP1CC	P36873	323 aa	Known RBP	13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	MAGEA5	P43359	124 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	RNPS1	Q15287	305 aa	Known RBP	13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	OR8G1	Q15617	311 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	HIKESHI	Q53FT3	197 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	SPSB3	Q6PJ21	355 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	SLC25A26	Q70HW3	274 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	TBC1D26	Q86UD7	250 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	ZNF695	Q8IW36	515 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	TMEM251	Q8N6I4	163 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	ZFP62	Q8NB50	900 aa	Predicted RBP	13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	MUCL1	Q96DR8	90 aa		13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	RIMS4	Q9H426	269 aa	Predicted RBP	13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	BOK	Q9UMX3	212 aa	Predicted RBP	13.15	□□□□□ -0.3
CELF4-223	ENST00000603232	TRBV6-6	A0A0A6YYG2	114 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	FAM24A	A6NFZ4	105 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	ZNF587B	E7ETH6	402 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	ZNHIT1	O43257	154 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	GDF1	P27539	372 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	GFRA1	P56159	465 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	SOHLH1	Q5JUK2	328 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	MEX3B	Q6ZN04	569 aa	Known RBP	13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	LINC00596	Q86U02	117 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	OR2G3	Q8NGZ4	309 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	FAM213B	Q8TBF2	198 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	RALY	Q9UKM9	306 aa	Known RBP	13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	NOSIP	Q9Y314	301 aa	Known RBP	13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	LIPG	Q9Y5X9	500 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	CHD6	Q8TD26	2715 aa		13.14	□□□□□ -0.31
CELF4-223	ENST00000603232	RBFOX3	A6NFN3	312 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	IFNA17	P01571	189 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	SLC25A6	P12236	298 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	NPBWR2	P48146	333 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	CISD2	Q8N5K1	135 aa	Known RBP	13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	ZNF565	Q8N9K5	539 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	CPEB3	Q8NE35	698 aa	Known RBP	13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	OR5D13	Q8NGL4	314 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	GGACT	Q9BVM4	153 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	FBXO7	Q9Y3I1	522 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	DMRT1	Q9Y5R6	373 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232		A0A087WWC5	75 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	ZNF724	A8MTY0	619 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232		H0Y980	276 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	SS18L1	O75177	396 aa	Predicted RBP	13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	TRAPPC6A	O75865	159 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	GLI4	P10075	376 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	OR2B8P	P59922	312 aa		13.13	□□□□□ -0.31
CELF4-223	ENST00000603232	KLRB1	Q12918	225 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms