RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 GALEQ14376 348 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 RSU1Q15404 277 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 SLC25A48Q6ZT89 311 aaKnown RBP12.95□□□□□ -0.34
USE1-208ENST00000600970 ZNF439Q8NDP4 499 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 CCDC107Q8WV48 283 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 TNFAIP8L1Q8WVP5 186 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 GHITMQ9H3K2 345 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 POMPQ9Y244 141 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 LINC01619G3V211 115 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 ORC5O43913 435 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 IGHV4-30-4P0DP06 118 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 MMDQ15546 238 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 Q3ZCU0 254 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 ASCL4Q6XD76 172 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 SATL1Q86VE3 508 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 Q8N1Y9 231 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 C4orf36Q96KX1 117 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 GPER1Q99527 375 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 FAM192AQ9GZU8 254 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 IFT22Q9H7X7 185 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 TPSG1Q9NRR2 321 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 ST3GAL6Q9Y274 331 aa12.94□□□□□ -0.34
USE1-208ENST00000600970 TRAV41A0A0B4J266 112 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 OR7C1O76099 320 aaPredicted RBP12.93□□□□□ -0.34
USE1-208ENST00000600970 ZNF134P52741 427 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 LSAMPQ13449 338 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 ATP6AP1Q15904 470 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 CT45A1Q5HYN5 189 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 ZDHHC13Q8IUH4 622 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 OR51A2Q8NGJ7 313 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 CT45A3Q8NHU0 189 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 ARPC1AQ92747 370 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 CPNE2Q96FN4 548 aaPredicted RBP12.93□□□□□ -0.34
USE1-208ENST00000600970 KRTAP17-1Q9BYP8 105 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 RIBC2Q9H4K1 309 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 PARP11Q9NR21 331 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 C19orf73Q9NVV2 129 aa12.93□□□□□ -0.34
USE1-208ENST00000600970 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 A0A087WW49 117 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 IGHV7-81A0A0B4J1V7 117 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 A8MZ25 164 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 GEMIN2O14893 280 aaKnown RBP12.92□□□□□ -0.34
USE1-208ENST00000600970 HLA-DRB1P01911 266 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 RAB3AP20336 220 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 CNTFRP26992 372 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 RBM11P57052 281 aaKnown RBP12.92□□□□□ -0.34
USE1-208ENST00000600970 NHLRC3Q5JS37 347 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 ZNF529Q6P280 563 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 MINDY2Q8NBR6 621 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 GABARAPL3Q9BY60 117 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 TOLLIPQ9H0E2 274 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 DHDHQ9UQ10 334 aa12.92□□□□□ -0.34
USE1-208ENST00000600970 MAGEB3O15480 346 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 CDRT1O95170 752 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 MT-ND4P03905 459 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 OR8U9P0C7N5 309 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 BLVRBP30043 206 aaPredicted RBP12.91□□□□□ -0.34
USE1-208ENST00000600970 ZNF497Q6ZNH5 498 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 AMIGO2Q86SJ2 522 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 LYPD6Q86Y78 171 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 ACBD7Q8N6N7 88 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 OR10V1Q8NGI7 309 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 OR52N1Q8NH53 320 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 TSEN15Q8WW01 171 aaKnown RBP12.91□□□□□ -0.34
USE1-208ENST00000600970 RITA1Q96K30 269 aa12.91□□□□□ -0.34
USE1-208ENST00000600970 MRPS28Q9Y2Q9 187 aaKnown RBP12.91□□□□□ -0.34
USE1-208ENST00000600970 PLECQ15149 4684 aaKnown RBP12.91□□□□□ -0.34
USE1-208ENST00000600970 C12orf77C9JDV5 145 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 AIPO00170 330 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 GYG2O15488 501 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 ATP8B1O43520 1251 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 LANCL1O43813 399 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 SOX15O60248 233 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 LGALS1P09382 135 aaKnown RBP12.9□□□□□ -0.34
USE1-208ENST00000600970 ACTBP60709 375 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 PITPNAQ00169 270 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 DNAL1Q4LDG9 190 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 ATAD3CQ5T2N8 411 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 HAPLN4Q86UW8 402 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 OR5AK2Q8NH90 309 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 OR4C12Q96R67 309 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 PDCD1LG2Q9BQ51 273 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 SPATA25Q9BR10 227 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 ANKRD60Q9BZ19 345 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 METTL9Q9H1A3 318 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 IL36GQ9NZH8 169 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 GNG12Q9UBI6 72 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 ING4Q9UNL4 249 aa12.9□□□□□ -0.34
USE1-208ENST00000600970 A0A1W2PN81 502 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 TMEM212A6NML5 194 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 HSPA12AO43301 675 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 JTBO76095 146 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 CSTBP04080 98 aaKnown RBP12.89□□□□□ -0.35
USE1-208ENST00000600970 RPSAP08865 295 aaKnown RBP12.89□□□□□ -0.35
USE1-208ENST00000600970 CHRNA7P36544 502 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 MPV17LQ2QL34 196 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 C19orf54Q5BKX5 351 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 LINC00596Q86U02 117 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 LHFPL3Q86UP9 236 aa12.89□□□□□ -0.35
USE1-208ENST00000600970 SGPP2Q8IWX5 399 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms