RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 IGKV1-33P01594 117 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 C6orf183Q5T699 404 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 RAB12Q6IQ22 244 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 IZUMO1Q8IYV9 350 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 MS4A15Q8N5U1 240 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 CCDC107Q8WV48 283 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 SGCDQ92629 289 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 TFAP2CQ92754 450 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 ST6GALNAC6Q969X2 333 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 PHF21AQ96BD5 680 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 ETAA1Q9NY74 926 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 TRAPPC2LQ9UL33 140 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 PNMA8CA0A1B0GUJ8 204 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 PIN1P1O15428 100 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 SC5DO75845 299 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 IGHG2P01859 326 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 PF4P02776 101 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 MGMTP16455 207 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 FUT3P21217 361 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 CD1BP29016 333 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 HNF4GQ14541 408 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 SYT6Q5T7P8 510 aaPredicted RBP12.52□□□□□ -0.41
VRK3-221ENST00000600284 STEAP3Q658P3 488 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 C10orf99Q6UWK7 81 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 MOB3BQ86TA1 216 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 ZNF554Q86TJ5 538 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 Q96M66 194 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 SELENOIQ9C0D9 397 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 PEX16Q9Y5Y5 336 aa12.52□□□□□ -0.41
VRK3-221ENST00000600284 C12orf77C9JDV5 145 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 TXNL1O43396 289 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 CRTAPO75718 401 aaPredicted RBP12.51□□□□□ -0.41
VRK3-221ENST00000600284 DUS4LO95620 317 aaKnown RBP12.51□□□□□ -0.41
VRK3-221ENST00000600284 SLC6A1P30531 599 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 ZNF137PP52743 207 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 SLC35A2P78381 396 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 UNQ9370/PRO34162Q6UXP9 181 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 Q6ZPA2 131 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 SLC25A48Q6ZT89 311 aaKnown RBP12.51□□□□□ -0.41
VRK3-221ENST00000600284 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 COMMD1Q8N668 190 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 Q8N6K4 173 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 RTN4IP1Q8WWV3 396 aaPredicted RBP12.51□□□□□ -0.41
VRK3-221ENST00000600284 RCC1LQ96I51 464 aaKnown RBP12.51□□□□□ -0.41
VRK3-221ENST00000600284 EAF1Q96JC9 268 aaPredicted RBP12.51□□□□□ -0.41
VRK3-221ENST00000600284 MND1Q9BWT6 205 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 BANF2Q9H503 90 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 ZFP57Q9NU63 452 aa12.51□□□□□ -0.41
VRK3-221ENST00000600284 DNAH3Q8TD57 4116 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 IGHV3-43A0A0B4J1X8 118 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 SERPINE3A8MV23 424 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 HBZP02008 142 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 PRB2P02812 416 aaPredicted RBP12.5□□□□□ -0.41
VRK3-221ENST00000600284 CDK1P06493 297 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 UBBP0CG47 229 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 IGHV3-43DP0DP04 118 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 IGLL1P15814 213 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 REG1BP48304 166 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 SLC35B1P78383 322 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 GPR50Q13585 617 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 ACSM3Q53FZ2 586 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 KHDC1LQ5JSQ8 128 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 FOXB2Q5VYV0 432 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 SLC35E3Q7Z769 313 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 FOXRED2Q8IWF2 684 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 TMEM104Q8NE00 496 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 OR51D1Q8NGF3 324 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 OR8H1Q8NGG4 311 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 OR4K15Q8NH41 348 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 CST11Q9H112 138 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 DCLRE1BQ9H816 532 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 MBNL3Q9NUK0 354 aaKnown RBP12.5□□□□□ -0.41
VRK3-221ENST00000600284 LIN7CQ9NUP9 197 aaKnown RBP12.5□□□□□ -0.41
VRK3-221ENST00000600284 GNG12Q9UBI6 72 aa12.5□□□□□ -0.41
VRK3-221ENST00000600284 NCBP2LA6PVI3 153 aaKnown RBP12.49□□□□□ -0.41
VRK3-221ENST00000600284 H0YHG0 523 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 PDCD6O75340 191 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 MOSP00540 346 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 GLT8D1Q68CQ7 371 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 SIGIRRQ6IA17 410 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 ZNF329Q86UD4 541 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 UBALD1Q8TB05 177 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 MRAPQ8TCY5 172 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 PHYHIPQ92561 330 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 NOL4LQ96MY1 436 aaPredicted RBP12.49□□□□□ -0.41
VRK3-221ENST00000600284 GON7Q9BXV9 100 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 ABCG5Q9H222 651 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 AURKAIP1Q9NWT8 199 aaPredicted RBP12.49□□□□□ -0.41
VRK3-221ENST00000600284 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 LRRC42Q9Y546 428 aa12.49□□□□□ -0.41
VRK3-221ENST00000600284 IGHV3-72A0A0B4J1Y9 119 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 AP4M1O00189 453 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 RCC1P18754 421 aaPredicted RBP12.48□□□□□ -0.41
VRK3-221ENST00000600284 ZNF134P52741 427 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 RPL23AP62750 156 aaKnown RBP12.48□□□□□ -0.41
VRK3-221ENST00000600284 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
VRK3-221ENST00000600284 SPHARQ15513 63 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 CT45A1Q5HYN5 189 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms